Gene detail

Detailed information of XP_074624926.1 in Acropora palmata

Genomic Location: NC_133887.1:21792869...21819066
NR annotation: XP_044171032.1, centrosomal protein of 104 kDa-like [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074624926.1

ATGCCCAGCAAAGTAACATTTCAAGTGGTGTACAGCTCCAGCTCTGACGACAACCATAGTGAAAAAGAACTAGAGTTTCACAGCCCTACAACAAAAGGATGGCAGTCCTCCAGGTTTTGTCTGTATCCTCAAGAGCTGGTTTTGTTGCTAAGGGAACCTACAAGGGTGCGCAAGCTGCAGATTCTTTCTCATCAGTTCCTGATCCCCAGCAAAGTTGAGGTGTTAATCAGCAGAGCTCCACCTGGACAGACTCCATCCCTGTCGAATTCTCAGTTCAAAAGGCTGGGATATGTTGCACTTTCAAGCAATGAAAGTACAGATTTTAAGGCGAGAGAGTTAAAATCTATTCACCTTGATTTTGAGGGAAATTTCATAAAGCTTGTTCTTCACAAGAATCATGTCAACAAGTACAACATTTATAATCAGGTTGGTTTGATTGCTGTGAACATCATTGGAGATCCTCTTGAGGTGCCCTCTTATTCTCAAGATCATGATGCTTTGAGAAGTGTTGATAGCCTTGTACAGGGCTACATGACCAACAGCTCAACACATGGACTCATCTGGGGAAAAATAAACAAACCAGACTTCATTGCTCGCACGGATGACTTGGCATTTGACATGTACCAGGACCCTGAGACAGCTACCTTGATAAGAAAACTGGATGACAAGAAAAGAGAAGCAGTGCAATTAGAGAGATATGATTATGCAAAAAAACTAACAGCTGTTATATCAGACTTGTACAAGATTGGCGAGAAGCTTGGGCGATACGAGGTGGAAAAGAAAAGAGCAGTTGAACTGGAGGACTATGATCTTGCGATGGAGAAGAAGAGACAAAGTGATGAATTCCGTTTGTATGTTTACAAACAGTTAGATATCCAAGAATTGTTAGAAATGAAAGGGAGACAGCCACACAAGCCAATAAACATAACTCCACCACCCCTCCCTCCAATAGTAGCAGATCACAGCAGATTTCCCCTTCTCCGTCCAGAGGAAGACTCCAGGTCTCCTCCACTATTGGCGCCGATAGGAGCAGAAATTTCGCCCCGAGAAGACACTCCAGCTGTCATAAGGAAGGATGATATTGCAGATGATCGTCCACTTCCAGCCCTAAACAACAAAAGGTCTCCAGAACCTGAAGTGGAAGTTGAAAGTCCTAGAGAGACTGCACCGAATTCAGATGGACCCGAGCCATTGAAAGAGAATGATCTCAGAACTGCGTCACTTATTATTGAAGTATTTGGAGAAGATCTGGTGCAACATGCATATTCCAAGCAATGGAAACATCGCCAAGCGGCAATGGAAAATGTGGATAGAGAAGTGACTGCAGATACACCTGAGCTGACAGCGGACAAAGATGCTAGGAAGGTAGCAAAAGCAACGGTTCAGCTAATACAGAAAGGAGTTAAGGACCAAGTGTTTTCAGTGTTTAATGCAAGTCTTGCAGTTTTGCGTTCGTTGGTCAAGAATTACATCCCTCGAAACAAGATTGTCAAATCGGAGATATCCCATGTGGCTGAAAAGGTGACCCCTCTTTTGTTGACGAAATCAGGCGAAATGGCTGCAAGGACTCGAGATGCCGCTTCTGCTATGCTCTTGGAATTAGCTGAACATAAAGATGTCAAGCCATTAGGCGTGATTCCAGATTATGCCACGAGGCCTTTTAAAGGAAAACAGCAAGTTGCCGCCCGTATGTACAAGAGCAGAATAGAGATCATTGAAAAGCTTATTGGAGTTCTTAAGTTGGACTCTGGTGAAAACGGGAGTCTATCTACCGAAAACATTATGCGGGTTGTATTACCGGCTCTTGAACACACCAGTGGTGAAGTGAGAGACGCGGCGTCTCGATTGGTCATTGAGCTTTACAAAATGGTGAAAGACGCTGTGCGAGATTACCTTCCACCCGATGAACCGGCAACTAGAAAAAACCCGCTCTACAGAAACCTGTTTGACGGGTTTGATAGGATCGACGGCAAACCAACAGAAACTGAGAGAAGGGCGCAGGCCAAAGCTGCCGCCGCAAACTCCGAGAAGGCAAAGCAGGCAGAGATCGCAGCTCTCCAAGCCCAACTTCAAGCACTTCGAGATATGGCTGGGGATTCTACCAAAGCGTCCGATCCTAAGCCAGCTGAAGAAGAGCCAATCGATGTGGACAGGATGTGCATTTTCTGTGGTGAGAAAAACGAGACATTTACCGAAGAAATGCTGGACATGCATTACTGGAAAAGCTGCCCCATGCTTAAGAGATGCGATTATTGTGCTCAGGTAGTCGAGATATCTGGAGTGAACGAGCACCTTTTGACTGAATGCGACTCTAGCGGAAAATTCATTCAATGTCCGCGCTGCAAGGACGCTGTCTTAAAAGCGGACCTTGAGGATCACTTTGCAGAGAAGAGCTGTCAGGAGGGCTTCAAGGGTCCCCGCTGTGTCCTGTGCAACAAAACTATTGATAAGGGAGACGAGGCTTGGAGTAAACATTTGAAGGACGATTGTGCGCCAAACAAGGCGAGACTGCAGCAGCAACAAGCCAGCAAAGCTCCAAGCCAAGCAAGCCTGCGCAGTTCCCGAGGAAGAGGTGGCAAAGCTACACCCATAGCTAGGGGTGCAGGAAAGGGGCGGGGGCGCCGAAGAGGAGCCATGCCAAAATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O60308	Centrosomal protein of 104 kDa OS=Homo sapiens OX=9606 GN=CEP104 PE=1 SV=1
Q80V31	Centrosomal protein of 104 kDa OS=Mus musculus OX=10090 GN=Cep104 PE=1 SV=1
D3Z8X7	Centrosomal protein of 104 kDa OS=Rattus norvegicus OX=10116 GN=Cep104 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003732 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21040 all species →	CEP104-like_TOG	Centrosomal protein CEP104-like, TOG domain	Repeat	Interproscan
PF21038 all species →	CEP104_N	Centrosomal protein CEP104, N-terminal	Domain	Interproscan
PF21039 all species →	CEP104_ZnF	Centrosomal protein CEP104, ZnF	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034085 all species →	Domain	TOG domain	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR048739 all species →	Domain	Centrosomal protein CEP104, N-terminal domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR048738 all species →	Domain	Centrosomal protein CEP104, Zn finger domain	Interproscan
IPR052607 all species →	Family	Centrosomal protein 104 kDa-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13371 all species →	GLYCINE-, GLUTAMATE-, THIENYLCYCLOHEXYLPIPERIDINE-BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005929 all species →	Cellular Component	cilium	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16458	CEP104; centrosomal protein CEP104	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.