Gene detail

Detailed information of XP_074625572.1 in Acropora palmata

Genomic Location: NC_133887.1:3659916...3677714
NR annotation: XP_015765572.1, PREDICTED: sterile alpha motif domain-containing protein 9-like isoform X2 [Acropora digitifera]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074625572.1

ATGGAATTTGATGAACTCAAGGTATTTATACACAGTCTGCCTCCAGATTGCCAAGAAAATTCACTGAAGGACTTCCTAGAAGCCGTGGGTGACTTTCCAGGAGGAGTGACCAAAGTCTCCATTCATCCTAAGAAGACATTTGCTTTTGTTACAGTTTCTCACACTCATGTGGCAAAAACCTTGTTGTCAAGGACACTGCTGTATTGTGATGGCAGTGGAAACTTCTACATGCTGAAGTGTTGTCCATATGTAAAGCAGCAGTCTAGAAGAAAGAGATTACCAGAAAGCAAGCCCAAGCAGAATCTCTGTTCACCTCAGTCAATGAAGCGGAAGGAAACTATTATTAGTAACCCGGCCAATTGCACTCCTTCCGTTCAAGTTCATCCATTTACTCCAGACTTCAGTGTGCTTTCACTCTCAAAGCCAAAACGGAAAAGAAAGAAGAAAGATGCTTTTGCAGTCTGGTTCAGTGATATTAGTTCTACTCCTTGTTCTGCTTCTTCAAAGAAAAGAACCACGGCAAGAAAAAAGAAGAAATCCAAGGTCTTCAAGCCAGAGTATCACAAGAGTGAATCATTTGAATTTGGGGACTTGCATTCAGAAAGAAAGCAATGCACCTCTAATGATACAGAACAAGTTACCAGCACCATTGAAGTATTCAACCTTGAAACTTCTGAAAGAGATCAGGTTCAGGAAAATCATGGATTAAACAAAGTTGAAGAGAGAGATATGGTCTTGGGCCATTATGAGAATGCTTCCAAACCTTTATGTGAGAGCCCCCGAAGTTCACTTACGCAGGTCATTATTGACCATGACTACCTTGGTCCTCTGTGTCTGCAATTTACAAGCCCTCCATCAGTTGCTGATGTGAAAAATGAGATCATGGACAGGACTGCGCTTCCAATTGAAGAACAAACTATTTATTGCAATGGCAAAAAGTTGAGTGATACCCTAGACCTTAGCTCTCTTGTTGTTGCACAAGGAAAACATCTGTCACTCTTGTTGTCGTCAGGTTCTCTGAGAGGTGGAGGTGACCCCAAGAAAGTTAAAAGTGAAGTGGAAGGTGCTACTGGAGGGGTGGAAGTAGATCCGGTTTTGCAGACTGCAGGGGAAGATGTGATGTCGATGGAAACGTGGGATGCGGAAAAAGTGGAAAGGTGGCTTCGTATTATTAAACTCAATAAATATGGCGCTGTTTGTCGTCAGGAATGCATCAGTGGAAGGGCTTTGTTGTTGATAGCAAGCAGAAGCGTGAACGAGCTTGTTAGAATCTTGAATTTAAAGAAAGGTCCTGAAACGATCCTGATGGATAACCTTCAGAAACCCTTGCAGGTGTTTGATAAAGGCAAGCCACAAATGCCGAGCTGTTCAGAAGCAACTATAGAGAAGTGGAGTGTCGAGGAATTGTGCAGTTGGCTTAAGGAGCTTGGTATCCCAGAAAATAGCCTGAAAGAAGCTGAGAATGAAGAAATCAGTGGGTCAGCCCTTCTTTTACTTAGAAAAAATGGAAAGCTGAGAGATTGTTTGAAAATGAAGATGGGGCCATGGATTGTCCTGGAGAATGAACTTTCATTGCATTTAGAAAGAAGTTGTGACATAAGTGGTGAAGTGTTGACAGCTCCAAATGGCCAGACTGTGGTTAAAAATAATTTTATATTAGAAACTGAAGTTGTGAAGGAATCTGCAGAGCCGGAGGCTATGAACAACCCATCGATCAAGACTTTTCGAAAAATTCCCTCGAAAATCAACTTATCTGAAGAAGAAAAGAAATTGTCGTTGTTGCGAAATGCGCTGCATCTAGATATTGAATCTCAAACTGAGTATAAGGATCAACACTGTTTAGTACGGTCAATTTTTGTGAAACGAGGTAAAGGTGCGAACGCCCTTGAAAAATTGTTCACTTTTATTGTAATCTTAAAGGAAGAATTTGTTGCTGATAATCCTTCAAAGCTGTGGCGGAAAATAAGAGATAAAGTTCATGACTGGATGAAACTGCTAACCAAGGAGAATCGAGAAGAGTTTCGGTGGAATGAAGGGTCGGAATCATTTTTACACGTGCCTTCCAAAGAGAATGTATCTTTACGTGACGGAAAGGTTGGTCAGGTATTTCTTGACAATCTGTCCGACATTGATTTTCAACAGAATGTATTTGTTGTTCTTGTCGACAAACAATTGTTTGAATCAAAACAAACTGCTGGGTACTTGTTTGAAATGGACAAAAAATTCAAGTACTCTTTCATTTTGAAACTGAATGCAAACGATAGCAAGTATCATGCGTCTTTTGATCCAAAGCGGCCAAGTCAAGATCTGGGATACAGTAAACATTTTAAGTCTTTGCTTAAAGGTGTTGGTGACTTGAGTTCAGATCTTTTGACCCCACTACCTCTCAGTCCGCCAGAAGCGCCGTGCACTCAAAGTCCACTACAAGTACAAGCTCCAAGACCATTTGGCGATGAAGTTTCAAGCTCGTTCTTCTACCAAGAAGGGTTTGTTTTAGATGCCTGGGAAACTGGTGCTAAAGATTTAATTAAGCCAGTACACGAATTTAAACTCATGCAAGGAGGAGAGCACGATGACGTAGACTTTTTCGACAAATTTTTATGTGAGACTCTACGGTTTGCATGTGGTTGTCTTAATGAAAGGACAAACGGAACCATTCATTTTGGCGTAGCCGATGAAGAGAGGCAACAAGCTCGTGGATATGAACCCCGACAAATTGTTGGTTGCCGGGTCCCTAACATGCCGCATTTGAACAAGAAGCTAACAGAGTATATTGACAAGTGTTTCGTTGGCGAGAGCAGAAGCAATGTGCATAATTGCATTCGACCACCCCATTTTATCTCAGTGAAAAGAGAAGGAGTTTCCAGTGATAAATTTGTCATTGAGGTCGACATCGAGCCGCGGATTGCCCTTTGTGAAGGCGAGATTTTTAAAGCTAGCTTTAAGTGCCTTGTTCGGGGAAAGGATGAAGAAGCGGCTTATACAAGACATGGATCAGAGACAGTTGCGATTGTTAATTTAAAGGATTTTGAAGAATACGTACAAAAACGTCGTCCAGCACTAGATGACTTAAGGAAAAAGCGAGAAGGTGAAATGTCAGACCAGAATAAGAAAGATCAGGATTCGCAGAAGCACCTTTATAGCAAGCTTGTGAGACTATTATGTGCAAACAAAGAAAGGCTGGATTCTTCACTATATCCGATTCTTGTTTTAAGCAAACCAGGCGATACCATGAGACAAGAATTTCTCGATGAAACATTTGGGTTTATACAGAGTATCCCTTGGAGGGCTATCGTTGATTTTGACGATGAAGGTTCAGATAGAAGAGGTCTTTGCAAGGTATTTAAGTCTGGCCCTGGCTCACCTCCATGTGACATACACGAGGCAGAAGACTATAATGAAAGTGAAACTCTCCTTGACAGCATTGAATGCATGGACCCAAGGATACACTGGATATTCGGGAATGGTTATACTACTCTTAATAGGGAAAAGTTTAGCCTTAAGCAGTGGAATAACTCCAAAAGAAAGAAGGGTCTCAACCACGTCATGCAGGCGTTGGCGAAAACGATTCCAAAAGGCAGAGCAGTTGTTTTGTTTTTGCTCTTTTCCAAGGAATGTGATACGTTGGCGGATACTTTTAAAGATTTCTGTACGTACTTTGAAGGCCCTAATCAACTTGTTTACGTTTCTGAAAACTCCGAAATGGTTAAAGATTGGGTAACGAAACTCTCAAATACATGTTTGGAGGAACACGAACTCAGAGAGAGGGGTGTGGTGGGCATGCAGTGGACAGAATTTCGGGAGTGCATGCAGCAATTAATTAGTGGTATTGATAGGCAGCAACTTTATGTTACTATGGCAAGTGGGAGCCCTTTTCCTTTATTGAACACTTTCAAGAACATTGATGTCGTCAGCGCGAATGAGTGTGAAGATTTGAGCAATTTAAGCTATACAGAACGCCAACGAATTTCATCAGAGGAGGAGAAAAAATTCTACAGAGGTTATTCAGTAACTTGGACAAATTTTTGGTTTACGGACAATCACAAGAACCATGTTCTACGAAGGGAAAACTATTCAAATTTGAAAGGTTTAATTGAAAACTTTCACTCCCGGGGATCCGATGGAAGAGTTCACACAATAACCATTTATCATCACATTGGAGCAGGAGCTAGTACTATGGCTCGCCAGGCTCTATGGGATTTTCGACAGAAGTCGGACTTTCCTTACCGTTGTGCGGTAGTAACAAAAATAGATGACAACACTTGCAAAGAACTTTTACAACTGAGGAAAATAGGTTATGAAGAGACCGAAAAGACCTGTTTTCCTCCAGTACTAGCCCTGGTAGAAGATACAGAGGATTTCTTATTCCGTGAGTTACGCTCTCAAGTCTTAGATCTTGCGAACAAGCTTTCAAGGACAAAGTGGCCCGTGTGTATATTTTTGTATTGCAAACCGACTCAAAAACCACGCTATTACCACTCACATGAAAAACAAACGAGTGTTTTTCTGGAGCAGAATCTTAGCGAAAAGGAAGTTAAGTGGTTTAAAGACAAATACACAGAATTAAGTAACCGTAATGAAGATCCTGAATACGACTTTCAAAGATATGCTAATGAAAACTTAATTTCCTTTATGATCATGAAGGAAAATTTTAACCCCGAATATGTTTCAAACATCGTTGACAAGAATTTATGTCAGATAACGCGAGATGTTGAGATAACTCTTCTTGAGTATACTTCTCTTCTCAGCTTGTTTAATCCGTACCCCGTGTTTGTTGCGTCTTTTGATACACTGATGTTGTCTTCAAGCCTCCTACAACGAAATATCTTTAGAGATTGGTTGGAGGATCTCACTCATGCAACGCGTATATTCTTGCGAGAGGTGGACGTGAGTGCAAATTTGGGAACGGGAAGGGCAATTGCTATAGTGCACCCGATTATTGCCAATAACCTACTCGATAGAATTGCCGCAAAAAAGGAAACTACTATATCTCAAATTGCTTTGAATTTTTTGAGATCTCCTTTGATAAAGAATAAAGGAAATTCTTTTACGGGGACTTACCTATATGAAGGTGCCAATAGGATGCTGAAGCAGCGAAAGAAATACGAGTATGGAGATGACGTTCAGACAAAGTTCTCACCCCTGATAGAGAAGATCTTGTACGTTGAGTGCCTGGAGGATGGCAATGGGAAATCTACAGAGGAAAGGATATATCAAGCCGCTGAGGTTTTGAAGGAAGGCTTGGAAAAATTTGATGATGCTATGCTCGCTCAGCAATTAGCCAGAGTGTTTTATCTAAACGCGAGTGCATTTTCTAAGTCTTCAATAGAATCCTGCTTTTCAAAGGCCATCGAGTTTTGTAAAAAGGCTCTTCAAATGATTCCAAATAATTCTTACTATTTTGATACCATGGGCCGCATCCAGGAAAGGAAAATCAAGAATGTGTTTCATCATGTTCTCCGAGACAACCAGATTTTGCAGATAGATGAAGTCACTCCGGTTCTTAAGCTTGGTTTCGTAGCAGCTGAGTGGTTTCAAAAGTCAATATCAGCTTCACCAGATCATCAAAACCTCAGTGGGTTTAATGGCGAACTTTCAGTGATGTTTTACATGCTAGACGTCTTACGTTGTGCAGGAATATTTAGGGGCCAATGTGGCCTAGATAAGTTAAAGATGTATCTTGCCTACTGCCAGAAAATTCCTCCAGAGGTTAAGGAACCTTGGAAAGAGTTCCATGAAAAGATAAAAGGGCTCAGAGATCGATTCAGTCACTGCATGGAAGGACTTCTAGAAACTTTTGCTATCTACAAAGGGAGTAGCATAATAGAGAAGTTTGCTCCGACGCGAATTGCTGACTTCAAGACTCGATATCTCATTTACTTTGGTACAAGTGAGGTCTGGGATACTAAAAGCCCTGAGGATCGATGGGAATATCGTTGGTATAAAATAAATCAGTATCTTGCTGGCGGTATTTTTTCAAGTGCTTTCAACTTGGATCAGTACTATAGAGATAACGTAGGGGAAATTCTTAAAGAGCTGAGAGAATTAGCCAACCAGAATTGTGAGGAGCCTGTCCAAAAGAATCGTTACAATGACTTTCTACTCATCATAGTAACTGAAATGGCTCTTCACTCGCCGTGTGGAAGAAAGAAAGGAACACTTGAACAATACAGAGAAATTTACTATTTTGTGGAGAAATTGGTTGAACTTGAGGTTTACGACGAGGAGCATAAACGACTTTATGGACATCTTTTAAAAATGATGTTTCTCTGGCCAAGAAAAGGTATGGAATTAGCAAACTATGGATTGAATTCGTTTTATGACGCAGTGAAAATACTCACAGAAAGGTGGAAAAGCAAAGATAGAGAAAGCATTGACCCAGACAAACTACACAAGCAGAAAATGCACAAACGCATGTCATTTAAGAAAGAGAAGAGACAGTATACCACTCTTTTCTATTTGGGTAAAGGTGTTGGATTAGAGGTTTTTGTTCACATCAATGAAGTGTTAGGAACCCGGGGATATTTGGAGTGGGAAAATTTCAACGTTAGGAAGAGACTCAAACGCCTTAATGGAGTGGTGGATAGTAAGAATATCATAAAAATTCAGAATCCATTGGACCCAAGTAAAACAGTTGACATCTACTACTCACCCCGTGAAGGTGGGTTTTCGAAGGAAGCTGTATCATTTTACTTAGGCTTTAGTTGGGCCGGACCGGTTGCTTTCGATGTTCAATATAGCAACAAAGGTAGCCAGAAGCACTCTGTGGGAGATAATCGGTTCCAAGAAGGTCGATTTCTAGTTTATAAGAAGTTTGAAGATCCCATGACTTACGAAGAGTACGCAGAAAAACTGCTGAAACTAAGGAAGGAGCTCGAGATAATTTTGGTCTTGAAGAAGAAAAAGGAAGACGGCGAAAAACTGGATGCAAAGCAGGAAGAAAAACTAAGATTAGAAGAAGACCTCCTGCAGAGACTGAAAAACTTGCAAATGAAGTTTGATTCCCTGGGAAATTTAGAAGACATGTATGACTGA

Protein

XP_074625572.1

MEFDELKVFIHSLPPDCQENSLKDFLEAVGDFPGGVTKVSIHPKKTFAFVTVSHTHVAKTLLSRTLLYCDGSGNFYMLKCCPYVKQQSRRKRLPESKPKQNLCSPQSMKRKETIISNPANCTPSVQVHPFTPDFSVLSLSKPKRKRKKKDAFAVWFSDISSTPCSASSKKRTTARKKKKSKVFKPEYHKSESFEFGDLHSERKQCTSNDTEQVTSTIEVFNLETSERDQVQENHGLNKVEERDMVLGHYENASKPLCESPRSSLTQVIIDHDYLGPLCLQFTSPPSVADVKNEIMDRTALPIEEQTIYCNGKKLSDTLDLSSLVVAQGKHLSLLLSSGSLRGGGDPKKVKSEVEGATGGVEVDPVLQTAGEDVMSMETWDAEKVERWLRIIKLNKYGAVCRQECISGRALLLIASRSVNELVRILNLKKGPETILMDNLQKPLQVFDKGKPQMPSCSEATIEKWSVEELCSWLKELGIPENSLKEAENEEISGSALLLLRKNGKLRDCLKMKMGPWIVLENELSLHLERSCDISGEVLTAPNGQTVVKNNFILETEVVKESAEPEAMNNPSIKTFRKIPSKINLSEEEKKLSLLRNALHLDIESQTEYKDQHCLVRSIFVKRGKGANALEKLFTFIVILKEEFVADNPSKLWRKIRDKVHDWMKLLTKENREEFRWNEGSESFLHVPSKENVSLRDGKVGQVFLDNLSDIDFQQNVFVVLVDKQLFESKQTAGYLFEMDKKFKYSFILKLNANDSKYHASFDPKRPSQDLGYSKHFKSLLKGVGDLSSDLLTPLPLSPPEAPCTQSPLQVQAPRPFGDEVSSSFFYQEGFVLDAWETGAKDLIKPVHEFKLMQGGEHDDVDFFDKFLCETLRFACGCLNERTNGTIHFGVADEERQQARGYEPRQIVGCRVPNMPHLNKKLTEYIDKCFVGESRSNVHNCIRPPHFISVKREGVSSDKFVIEVDIEPRIALCEGEIFKASFKCLVRGKDEEAAYTRHGSETVAIVNLKDFEEYVQKRRPALDDLRKKREGEMSDQNKKDQDSQKHLYSKLVRLLCANKERLDSSLYPILVLSKPGDTMRQEFLDETFGFIQSIPWRAIVDFDDEGSDRRGLCKVFKSGPGSPPCDIHEAEDYNESETLLDSIECMDPRIHWIFGNGYTTLNREKFSLKQWNNSKRKKGLNHVMQALAKTIPKGRAVVLFLLFSKECDTLADTFKDFCTYFEGPNQLVYVSENSEMVKDWVTKLSNTCLEEHELRERGVVGMQWTEFRECMQQLISGIDRQQLYVTMASGSPFPLLNTFKNIDVVSANECEDLSNLSYTERQRISSEEEKKFYRGYSVTWTNFWFTDNHKNHVLRRENYSNLKGLIENFHSRGSDGRVHTITIYHHIGAGASTMARQALWDFRQKSDFPYRCAVVTKIDDNTCKELLQLRKIGYEETEKTCFPPVLALVEDTEDFLFRELRSQVLDLANKLSRTKWPVCIFLYCKPTQKPRYYHSHEKQTSVFLEQNLSEKEVKWFKDKYTELSNRNEDPEYDFQRYANENLISFMIMKENFNPEYVSNIVDKNLCQITRDVEITLLEYTSLLSLFNPYPVFVASFDTLMLSSSLLQRNIFRDWLEDLTHATRIFLREVDVSANLGTGRAIAIVHPIIANNLLDRIAAKKETTISQIALNFLRSPLIKNKGNSFTGTYLYEGANRMLKQRKKYEYGDDVQTKFSPLIEKILYVECLEDGNGKSTEERIYQAAEVLKEGLEKFDDAMLAQQLARVFYLNASAFSKSSIESCFSKAIEFCKKALQMIPNNSYYFDTMGRIQERKIKNVFHHVLRDNQILQIDEVTPVLKLGFVAAEWFQKSISASPDHQNLSGFNGELSVMFYMLDVLRCAGIFRGQCGLDKLKMYLAYCQKIPPEVKEPWKEFHEKIKGLRDRFSHCMEGLLETFAIYKGSSIIEKFAPTRIADFKTRYLIYFGTSEVWDTKSPEDRWEYRWYKINQYLAGGIFSSAFNLDQYYRDNVGEILKELRELANQNCEEPVQKNRYNDFLLIIVTEMALHSPCGRKKGTLEQYREIYYFVEKLVELEVYDEEHKRLYGHLLKMMFLWPRKGMELANYGLNSFYDAVKILTERWKSKDRESIDPDKLHKQKMHKRMSFKKEKRQYTTLFYLGKGVGLEVFVHINEVLGTRGYLEWENFNVRKRLKRLNGVVDSKNIIKIQNPLDPSKTVDIYYSPREGGFSKEAVSFYLGFSWAGPVAFDVQYSNKGSQKHSVGDNRFQEGRFLVYKKFEDPMTYEEYAEKLLKLRKELEIILVLKKKKEDGEKLDAKQEEKLRLEEDLLQRLKNLQMKFDSLGNLEDMYD

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IVG5	Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens OX=9606 GN=SAMD9L PE=1 SV=2
Q69Z37	Sterile alpha motif domain-containing protein 9-like OS=Mus musculus OX=10090 GN=Samd9l PE=1 SV=2
Q5K651	Sterile alpha motif domain-containing protein 9 OS=Homo sapiens OX=9606 GN=SAMD9 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005580 (this species only)
Ubiquitin family	ULD\|UFD/UBQ\|UBQ_PIM · all ubiquitin genes in this species

Pfam domain

No Pfam domain signature was detected for XP_074625572.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR000626 all species →	Domain	Ubiquitin-like domain	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16155 all species →	DED DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_074625572.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.