Gene detail

Detailed information of XP_074626035.1 in Acropora palmata

Genomic Location: NC_133887.1:14466129...14516287
NR annotation: XP_029207544.2, protein ELYS-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_074626035.1

ATGAGCCCTATTGATGTAGTTGATACTGAATCACATGATATGGCACAACTCAGAAATGCTGCAAGGAGGAATGGAACCCACTTAGCTATTGAGATAGGAAATTTTAGTCATGTTTTTGGGAGGTTTTCATATGTGCAATGCGATTCTACTGAAATGAAAAATATGTCCTCAGGAGAGGTATTTGTGACAGCTGTTAAATACATAAGGCAAACAAGCATTCTGGTCATTGGATTTAACTTTGGCTGCTTTCAAATGTGGAACTTGGAATCTCTGACTCACATATACAGTAGTCAGGTGGATCGGTATTATTCAGCTATCACACATTTCACGTATCAGGAACCAGAGGATGATCCTCGTTATTGCTGCTATTTGTGGGTTGCCAGGGGGCCTATAGTCCCAGAAAACTCTCCAGAAACACCAGCTACTCTCACTTTGTATCAACTTGTTTTTGCATCCAGAGATCATCTACCAGGTTATGGAATTATCTATAAGGACCTAAGTGGCGTTGGGCGGAGATTTGAACACCAACTGACTGCAGATGCTCATCATTTAGCTGATGCAACTTCAGTTGGTAGCAAAATAATATGTTGCTACACATTGGAACAAGATGGAAGTTCATTTTACAGGCCAAGAGTGGATGATGATGTCCCTGAAGAGAGTATTTCTCAAATGACCTTAAGTGATAACTTTAGGGACCTTACTTTGGCTGTTTGTGTTTGGGAGGCTCCAGCACATGACCAACATTCGAGACCAACATGTTATCTGGGAATTTTTGATGTCAATTGTTGGTATCAATCTCAAATGCCTGCATCTATCAGGGATGCAATGTTTGGCAGTAAAGATTACTCTTGCCCATTCTTTGCCTTCATCTCCTTGGTGGACATATTAGATGTTGCTTCACCTGATGGCATAGTGGATATCTATGTTGATGCTGCAACAGTTTCCAATTTTGTATCAAGTGTTAGCTCCACACTTGAGCAGCATCTGTGGCCAGCATCTCTTAAATTTGATACCTGCTGCCTTATGGAGACAGGACTTGTGGATGCAAAGTTTCTAGGAGTCCAGCGACAGATTCTGGCAAACATAAGTAAGGAGGGAATAAGCTGTTTATCTGATGCTCATGAGTATTTCAATGTATGTTATGCTGCCGGGCTGTTGCCAAGAAATTTTGACCTTTCCAAGCCACAGGACAAAACCTTTCACCTTGAGGCTGTACTGTCTGTGGCATTGGAACATGGCCTGGTCACTTTCATAGTATCCTGTGTCCAGAAACTGGGAGCAGGAAATGTGGTTCATGCAGGCTGCAGTTTGAAGCTGATGTTAGATTGGGCCTGGGACAGAGTTGTGGAAATTAAGAATCAACTGGATCAACTGTGTGTTCCATTGTTTGATTGCGGAGGTGGTACCCCAGATGATCAGATGCTGTTGATGTTGGAGAATCAAAACACTCAGCTGAGTAGTTTGACAGCTATCTTTCAAGCACTACTCACACAGTCAGCAACTACAACTCATCAAGGTCTCAAAGATCTTGAAGCAAAATACAATGTTGTCAGTATTCTTTCCATGTATCTGAAAGTCGTGTTATGGTTCATTGGCCAGGGGTTGTTACCTGAGCAGCCAGAAGGCTCCACATCAGCAGCAAGAAGAGGTCACTCTTACCCATCCGTGTCGATAAAAAGAGCTTGTGAAAGCAGAAGAGAGGATTTGGAAAACCTTTGTTTAAATGATCCTGGTTCCATTGGCCTGATGGTTGATAAGCTTATTGCTCAGCTGGGCAGCCAAGGGGTCAGTCAGTGGATTCTCAAAGGAGGAAATGAGATATATCCACCTAGCAGCTTGCATGGACTGTGCAGCTTGTATTTAATTGAGAATGTTCACCCCAACTGGAAACACTGCATAGTGTTTTACCTTTTGCTTGATTTGTGTTTTTTGGAAACTGAGCTTCAGCGGAATGAGGTAGCTGCAAAATTCGCTGGACATTTCAAAATTCCGGAGGGATTGATAAGACTTGTTCAGGGTTTTTGGCTTCTTGATCACCAATACTTTGAGGTTGCAGTGACAACTTTGGTTGATCCATTGATAAAGACGGAACTTGGTGAATGGCAGAAAAACTTCATTATGAAGACTCTCCTTTTCCAAGGAGAGTTTCAGAAGGCACTGTACTTTATGAAGGTTACGCAGCCCGCTGTACAGGGCGTCAGTGATGTCAAGTTGTTCCTAAGTGTATTGCTAGCCAATGGGAAAGTTGCAGAGGCATTTAGCTTTCAGAGAAAGCATCAGAACCCCAAAGCAAACAAAGATATCCTCTATCACTTTTTTAATGGTTGTCAACAATCTGGGAACATGAGCAAATTGTTGCAACACTCTCTGGATTCTACTGAAGAGGACATGCTGACGAATTTTCTTCTTGAAGAAACCTTTCCCTCTTCCAGAGAGCTTTTGTTTATGCATTACCTTCAGAGGGGTCGTTATGTGGAAGGGATCAGATTGAACGAAGTTCTCAAGAAAGACAAACTGAGCCAACAGGACGAGAGAGCAAAGGTCCGAAGTGCGCTCGTGGATGCACATGTTCGATGTTTACCAAGAGTTCAGCGTAAACTTTTGTTTGGCCCAGACAAGCCTGCACATCAAGCTACAGCTTTAACAGAAGTTGCTCGTCCCAAGCCACTCTCCACTGTGGTGCGAAAAGTAGATAAAGGTCGTCCGTTATCCCGGGCAGTCCTTCTTAGCTCAGCCATGGATAAAGTGCATGAGATACGGATGCAATCGGAGATTGAAGCACAGCAGAGTAGACCAACGGAAAAACGGGAATGCCAAGAACCCGAACCTTTTGTCAGTACTCCAGTCACACCAAGAGCTAAATGTAGATTGACAGATTCAAGTAAAGTGGGAGTTGTTTATCCATCAGTCAGTAAACAGAGTTCAGAGACCAGGCTTTCGCCGATATCTGAGAAAGTAAGCCCTACCAGGAAAGTAACATCACCCACTTTCTTGGACAAGAGAAGCAGGCGACAGTTTTTCTCAGGTGCTGAAGCTCTCTCACTTCTGGCCACGCCACCAATTCTTAAAGTCAAGCCGATAACTCCTGGATTATCGATAAATAACACAGAAGCTGTAAATATTTCAACACCACAATCTATTTTAAAGATTACCCGAGTAATACGGCGTACCTCACCCCAACCCTCTCCTAAATCTTCCCCTCCAACCACGAGGCGTGGCTCCTCCGAACAGTTGTCCAGGCCTGAGACAAGTGCCCATAATGACACATCAGAATTTGCTACTCCTAGCAGACGGATTAGGTTTGCTGGTGAGAGTACCTCTTCCCCATCCAGGCTGAGTCCTCCAAAACAGACTGATGCTGTGTTGACACCAGACACAGGTCCAAGTCACGTGTCCAATGAGAGAGACGTCATCGGAATTGGCACTAAGACCATGGCTGTGGAAGATACCGAGTCGCAACAAGACGATCAAAGTTTGATGCAGGACATTGTGGAAAGTGCAACAGACGGAGTTGACGAGCAGGAAGAAACCGAAGTACAAATAACAGCTGCAGTGATGGATATAACAGGTGACAGCGATGATTTGGAGGAGGAAGCAGCTGGAACTCACGATGATGACTACAGTAGTTACGAGCTGGATGATAGTGATACAGCAGCCATGGATGCCGACAGCGAAAATGAAAGTGTAAAAGAGTCACCACAAATAACAAGTGTTACCGTAGAGCAGACCGAAGAACACGTCTTTGCAAAATTATCTCCTGTTGCAGAACAGCCATCGTTCGCTGAAGAGCCACCAAGTCCTAGACGCGTTTCTGATGAACCTTCCACTTTGCCACCACCCTTGAAAGAAAGCCAACCAGACAGTGAGGAATTGTCTCCACCGTCCTGCAGCGGAAGTAGGAGTCCCCAGAAATTGTCGCAATCTGCTGAAATCTTTTCATCTGAGCTTGTTCAGTCCCGAACACCACCACAGTTGGGCCCAAACCAAGAAACACTTGAAACAGCAGATTTATCCTACGTCTTCTCACCGCCCGCTGTTCTCCAAACACCGCCAAGAGGTGCAACTACACCTTTAGCGGTAGCAGAGTCAAGTACACCCTCTCTTGAATTCATTTTTTCCCCTCCTTTGACACGATCCATGGCTAGACGCAGGTCTTCCGGAATAACTCCAGGATCTCAAAGCTTTATCAGGGAATTTTCCGGAAAAGCCACTCCGCACCAGTCACCATCCAACAGCCCGATATCTTTTGTGTCACCTGTCCCGCATCCTGAATCATCACCTCGTGGCTCCCGGAAAAGGGGTGTAAGGTTGCCGGCTCACTCGATGACTTTACGGGCAAGAAAGTGTCCCGCGCGACCAACACGATCTGCCAAACTGCCGCATACCAAGTTGTAG

Transcript

Protein

Uniprot

Uniprot term	Description
Q8WYP5	Protein ELYS OS=Homo sapiens OX=9606 GN=AHCTF1 PE=1 SV=3
Q5U249	Protein ELYS OS=Xenopus laevis OX=8355 GN=ahctf1 PE=1 SV=1
Q8CJF7	Protein ELYS OS=Mus musculus OX=10090 GN=Ahctf1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16687	ELYS-bb	beta-propeller of ELYS nucleoporin	Repeat	Interproscan
PF13934	ELYS	Nuclear pore complex assembly	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032040	Domain	ELYS, beta-propeller domain	Interproscan
IPR052620	Family	ELYS/MEL-28 Nuclear Assembly Factor	Interproscan
IPR025151	Domain	ELYS-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21583	ELYS PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25129	AHCTF1, ELYS; protein ELYS	-	Nucleocytoplasmic transport	ko03013	deepkoala