Gene detail

Detailed information of XP_074627872.1 in Acropora palmata

Genomic Location: NC_133888.1:21811832...21823764
NR annotation: XP_015768916.1, PREDICTED: SPARC-related modular calcium-binding protein 1-like isoform X2 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8BLY1	SPARC-related modular calcium-binding protein 1 OS=Mus musculus OX=10090 GN=Smoc1 PE=2 SV=2
Q62288	Testican-1 OS=Mus musculus OX=10090 GN=Spock1 PE=2 SV=2
Q08629	Testican-1 OS=Homo sapiens OX=9606 GN=SPOCK1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10591	SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	Domain	Interproscan
PF00086	Thyroglobulin_1	Thyroglobulin type-1 repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR000716	Domain	Thyroglobulin type-1	Interproscan
IPR019577	Domain	SPARC/Testican, calcium-binding domain	Interproscan
IPR036857	Homologous_superfamily	Thyroglobulin type-1 superfamily	Interproscan
IPR051950	Family	Developmental regulator and protease inhibitor	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12352	SECRETED MODULAR CALCIUM-BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan