Genomic Location: NC_133888.1:11828309...11947805
NR annotation: XP_044172413.1, LOW QUALITY PROTEIN: titin-like [Acropora millepora]
Species Acropora palmata · all data for this species · gene families
| CDS |
| XP_074628563.1 |
| Protein |
| XP_074628563.1 |
| UniProt accession | Description |
|---|---|
| A2ASS6 | Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 |
| Q8WZ42 | Titin OS=Homo sapiens OX=9606 GN=TTN PE=1 SV=4 |
| O01761 | Muscle M-line assembly protein unc-89 OS=Caenorhabditis elegans OX=6239 GN=unc-89 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001172 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07679 all species → | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF00435 all species → | Spectrin | Spectrin repeat | Domain | Interproscan |
| PF00069 all species → | Pkinase | Protein kinase domain | Domain | Interproscan |
| PF00621 all species → | RhoGEF | RhoGEF domain | Domain | Interproscan |
| PF13716 all species → | CRAL_TRIO_2 | Divergent CRAL/TRIO domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036179 all species → | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR007110 all species → | Domain | Immunoglobulin-like domain | Interproscan |
| IPR017441 all species → | Binding_site | Protein kinase, ATP binding site | Interproscan |
| IPR000719 all species → | Domain | Protein kinase domain | Interproscan |
| IPR035899 all species → | Homologous_superfamily | Dbl homology (DH) domain superfamily | Interproscan |
| IPR001251 all species → | Domain | CRAL-TRIO lipid binding domain | Interproscan |
| IPR051129 all species → | Family | Calcium/calmodulin-dependent serine/threonine kinase | Interproscan |
| IPR018159 all species → | Repeat | Spectrin/alpha-actinin | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR000219 all species → | Domain | Dbl homology (DH) domain | Interproscan |
| IPR001452 all species → | Domain | SH3 domain | Interproscan |
| IPR036865 all species → | Homologous_superfamily | CRAL-TRIO lipid binding domain superfamily | Interproscan |
| IPR013098 all species → | Domain | Immunoglobulin I-set | Interproscan |
| IPR011993 all species → | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR002017 all species → | Repeat | Spectrin repeat | Interproscan |
| IPR011009 all species → | Homologous_superfamily | Protein kinase-like domain superfamily | Interproscan |
| IPR003598 all species → | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR013106 all species → | Domain | Immunoglobulin V-set domain | Interproscan |
| IPR008271 all species → | Active_site | Serine/threonine-protein kinase, active site | Interproscan |
| IPR036028 all species → | Homologous_superfamily | SH3-like domain superfamily | Interproscan |
| IPR003599 all species → | Domain | Immunoglobulin subtype | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47633 all species → | IMMUNOGLOBULIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0004672 all species → | Molecular Function | protein kinase activity | Interproscan |
| GO:0006468 all species → | Biological Process | protein phosphorylation | Interproscan |
| GO:0005085 all species → | Molecular Function | guanyl-nucleotide exchange factor activity | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
XP_074628563.1.Transcript abundance of XP_074628563.1 across 84 RNA-seq samples of Acropora palmata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| all_coral_tissue · exposed | 46 | 0 | 0.00 | 0.00 | |
| all_coral_tissue · baseline | 38 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APALM_TPM,
StringTie quantification over 84 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
