Gene detail

Detailed information of XP_074628792.1 in Acropora palmata

Genomic Location: NC_133888.1:21480091...21502875
NR annotation: XP_044183169.1, cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_074628792.1

ATGATGTCTGGTGCACGAAAACGCCAATATGATGACTTCACTTACGGAGGTACAGAGAAGAAAATAAAAGCTGAGAGTAGGCTTTCAAGTAGTGATTCCGAGGACGAGCTGGGTTCTCCATCGTATGCCAGCTTTCTTCAGTACACAGACAGCAAACCTTTTTACAGCGATGTTGCAAAGAAGCAGATGGAAAGAATGGGTTACAAGGGCGAGGAACGTCTTGGAAAGTCAGAATCAACATACAGTAACTTTGCGCAAAGGCAAATGGAAAGCATGGGTTTTGAGCAGGGAAGAGGCTTAGGAAGACATGGCCAGGGAAGAGCTGATATCATAGAGGCCTCGCAACAGCGTGGAAGACGTGGTCTGGGTTTCAAAGTTGAAGGTTTTGATGATAAAGATTTCACTTGGGAAGAGGAGGATGAGGTAGAGTTTGTGGAGCACAAAGCTTGCATCCCATCCTGTACTAGATCTACTCCAACTAAACAGGAGATGGAGGACTGGGTCAAGATTGACAAGAAAAAGTTATTTATTGATGATGAGACACAATTTTGTAAAGACGATGTCTTAGCTGAAGTTCTAAAGAGCAAGAGTGTTTTTGATGCTCTTTCTGGTGATGAATTTCTTAAGGCAAGAACAAGAGCCAATCCTTATGAGCTGATAAGGGGAGCAATCTTTCAAAACAGGGCTGCCATGAAGATGGCAAATATGGATTCTGCTTTTGACTTTATGTTCACCAGCCCCAAAGATGCTACAGGAAAAGATGTGGTTGGGTCAAATGAACTTCTTTACTTTGCCGATTTGTGTGCTGGCCCCGGAGGATTCTCAGAATATGTCCTGTGGCGCAAAGGATGGCAAGCAAAGGGATTTGGCTTTACACTAGTTGGTGACAATGATTTCAAACTTGAGCAGTTCCTAGCTGGAACACCAGAAACATTTGAGCCACATTATGGTGCAAATAATGATGGAGATATCTTCAATGCAGATAATCTGACAGAATTCAGAAGATTTGTTCTTGATTCATCTGATAACAAAGGAGTTCATTTTGTAATGGCAGATGGGGGTTTCTCAGTGGAAGGTCAAGAAAATATTCAGGAGATTCTCAGTAAACAACTATATCTTTGTCAGTTTCTGTGTGCATTGTCTATCTTGAGACCAGGTGGTCATTTTGTGTGCAAGGTATTTGATCTGTTCACTCCATTCAGCATTGGTTTGGTGTACCTCATGTATCGAGTTTTTGATGAAGTGTACATCTTTAAGCCAGTCACAAGCAGACCAGCTAATTCTGAGAGGTATGTTGTGTGCAAAGGTCTTCGTGAAAACAGCCAAGCTGTTCATGAATTCATGTTTAATGTTAATGTAAGGATAAACAAGCTCAAAAAAGAAGATATACTTGATGTTGTTGAGGTAGTTCCATTGCATATTTTACAGGAAGATGAAGAATTTTCATCTTACATGCTCGAATCAAATAACAGAATAGGAAAGGTACAAGCTAATTCGCTCAAGAAGCTCAGAGCATACGTCCAGGATACAACGTTGTTCGGGCGTTACGACCAAGGAGAAGTCAAGAAAACGTGTTTGGAAAAATGGAAGATTCCAGAGCAAGCTCGGGCGGCTCAAAGGGCACAAGATCCAGATGTGAAGTTTGATGAACTTTGGAAGGGTTTTGATGATGAACATTGTTTCGATTCTGAAGCAACTAAGCTGACGTCCAGAAATATCCAGAACCTGAAATGCTTGTACAATTACAAGTGTTTTGTGTCTGGTGGCGAAAGATGGTTTCTTATGGGACTAGGGCGCAGCAACATCTACAAGTGGGATGGCAAACCAAACTATTTGAGTTCAACAAGATGGCGCAAGTTGGAAAATTTTTATTTGGAGCTTCCTCGGGACACTTTGATTGAAGTGGAAATCATACAGGAGCTAAGAGGGGAGGGAAAGGGACAAAGAAAAGCAATTGCTGTTCATATTGTTGACGCTGTGATTCTTGGAGGAAAAGATGTAAGGAATCTGCATTACCACGAAAGAATGTCAATGGCCGGGTTACTTGTGAAAGCAGTGAACAAACCAACAATCCCAACAATGGTTCCTTTAAGACTCAAACAAGTTTTCCGAGCGGACAGTAATTCACTGAAAGAAATCTTCTCCAAAGTTGAAATGAAAGTCGTTAAAGGAAAGAGCAGAGTACCAAGGGAATGTTTTATGCTGGAGGAAGACCGGCATATTTTACCCAGCGGAATTTACTTTATTAAACGAATTCAAGAGCCTTGGACATACGCCCACAGTCGCTCTGCAAAGCGGTTATATTTCTTTAACAAGGACACAAATGAGGCCACATTCGAGTGTCCGGGAGATTCAGCTGCTTCCTTTAAGTCGTCATTGTGCACTCGGTACTTCTGGTCATGGGAACACGTGGACAGTAACCCTGGTGAAGGAGCAGACGTAGATAAGAAAGCACTTATCGAGTTCTTCTCTGCGGCGCAAAACAACTTTTTGAGTGGTGCACCACGAAAATGA

Transcript

Protein

Uniprot

Uniprot term	Description
Q803R5	Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Danio rerio OX=7955 GN=cmtr1 PE=2 SV=1
A2VE39	Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Bos taurus OX=9913 GN=CMTR1 PE=2 SV=1
Q8N1G2	Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Homo sapiens OX=9606 GN=CMTR1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01728	FtsJ	FtsJ-like methyltransferase	Family	Interproscan
PF01585	G-patch	G-patch domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002877	Domain	Ribosomal RNA methyltransferase, FtsJ domain	Interproscan
IPR001202	Domain	WW domain	Interproscan
IPR000467	Domain	G-patch domain	Interproscan
IPR025816	Domain	RrmJ-type ribose 2-O-methyltransferase domain	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR050851	Family	mRNA Cap 2'-O-Ribose Methyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16121	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004483	Molecular Function	mRNA (nucleoside-2'-O-)-methyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006370	Biological Process	7-methylguanosine mRNA capping	Interproscan
GO:0097309	Biological Process	obsolete cap1 mRNA methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14589	CMTR1, FTSJD2, MTR1; cap1 methyltransferase	EC:2.1.1.57	Messenger RNA biogenesis	ko03019	deepkoala