Detailed information of XP_074630408.1 in Acropora palmata

Genomic Location: NC_133889.1:19484547...19514995
NR annotation: XP_044174432.1, E3 ubiquitin-protein ligase HECTD1-like isoform X3 [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9ULT8E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens OX=9606 GN=HECTD1 PE=1 SV=4
Q69ZR2E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2
Q9VL06E3 ubiquitin-protein ligase Ufd4 OS=Drosophila melanogaster OX=7227 GN=Ufd4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003326 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18410
all species →
BTHBBasic tilted helix bundle domainDomainInterproscan
PF07738
all species →
Sad1_UNCSad1 / UNC-like C-terminal FamilyInterproscan
PF00632
all species →
HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF06701
all species →
MIB_HERC2Mib_herc2DomainInterproscan
PF12796
all species →
Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010606
all species →
DomainMib-herc2Interproscan
IPR041200
all species →
DomainFKBP3, basic tilted helix bundle domainInterproscan
IPR037252
all species →
Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR012919
all species →
DomainSUN domainInterproscan
IPR000569
all species →
DomainHECT domainInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR002110
all species →
RepeatAnkyrin repeatInterproscan
IPR036770
all species →
Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR035983
all species →
Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR045322
all species →
FamilyE3 ubiquitin-protein ligase HECTD1/TRIP12-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45670
all species →
E3 UBIQUITIN-PROTEIN LIGASE TRIP12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567
all species →
Biological Processprotein ubiquitinationInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000209
all species →
Biological Processprotein polyubiquitinationInterproscan
GO:0006511
all species →
Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016607
all species →
Cellular Componentnuclear speckInterproscan
GO:0043161
all species →
Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0048856
all species →
Biological Processanatomical structure developmentInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan
GO:0070534
all species →
Biological Processprotein K63-linked ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12231HECTD1; E3 ubiquitin-protein ligase HECTD1EC:2.3.2.26
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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