Gene detail

Detailed information of XP_074630765.1 in Acropora palmata

Genomic Location: NC_133889.1:7032589...7060818
NR annotation: XP_044180128.1, exportin-5-like [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074630765.1

ATGGTAAATTCATCAGATGAACCTGCTCACATTAAGGAGGCTCTGTCACGGCTTGTGGTTGAACTAATAAAGAGAGAATGGCCTCAGAACTGGGGCTCACTGCTGCCTGAGCTGAACAATATCTGTGGATTTGGGGAGATTCAGACAGAAATAGTTCTGATGATTTTTCTTCGATTGGCTGAGGATGTGATTACAATGGACAGCAATTTACAGTCAAGCAGGAAGAAAGAGATTACCAATGAATTAAATAGACTTGCTCAGGAACTATTTGTATTCTTTCTTGAAACATTGTCTACCAATATTTCAAGTTATAGAGTTTTAAAGAATCACATGGAAAATGGTGATACTAGTTGCAAGTCTCAGGCTTCAGTGCATTTGCGCCTTGCAGAACAGACTCTGAAGACACTGACAGGATACTTGGACTGGGTGAAGTTTGGAGTGCTGTATGCAAAGAATTATATCATTCTACAGATGCTGTGTTTATTGCTGGAGGAAGAATCTCTCAAGATTCCAGCTGCTGAATGTCTGCTTATTATTGTCAGTAGAAAGGGAAAATACGATGAAAGGACCCCCTTATTGGAACTTTTTAGTGAAGATGCTATGTCAGTCATGTTTTCTGCTGCCCAGAAAGCAGTGACAGCTGAATTTGATGAGAGGCAATACCTTTTCCTAAAAAGATTGTGCCAGCTTCTTGTTACTCTTGGTGAAACCCAGCTTTTCCATTTATGGAATTCACAAAATCCTCATGAAAAGCCTCCAAACTTCAAAGAGTATTTAGAAGCTATGGTTGCATTCTCAAAGCATGAAAGTTTGACCATCCCTCACTTAACAAACCTGCTCTGGCTGACCTTCTTGAGGAATCCTGTCATCTCCAAGGATGAAACATTCAGATCAATGTTTCCAGCTCTTCTTGAAGTAGCCAAGGCCAAACTTTTCAAGGTTCATGACCCAGAAGATGATACCTCTCCAGGAAGTATCTTTAACAAAGAGGACTTCAACAGTGAGAGGGAATTTACATCTATTAATGGCCAGGTGAGAGGTGAAACCATGGACATCATTCGTCAAGTAACATTGGAATATCCAGTTGAGACCTTCCTGTTTGGAGCAAATTGGTTGCTAGAAGTGGCAACACGAGCAGTTTCCACTTCAAGCTATGCTGGCAGTGCTTGTGATGCAAAGCAAGCTAAGCAAGAATGGGATGGACTCACTCGTTACTTTGATGCTGTCATGTCAAGATTTTTTAAAGTGGATAATCATCAGGAGATTATCCAAGGCCAGGTGTTATTCCATGGAGGATCCATAGGTTTCATTGAATTAGCAAGAAAATGTATACAGGCTCTCATTAATGTGGAATCCAAGGAACCTCTAATTCTTGCAAGTTTAATGGATGCTATGCATTCTCTCTTTCCTTTTCTTAAATACAGTGAAGACTTACTTATGGATGTTCTTAGAAAGCTGTTTGCTGTGGTCTTGTTTAACACAACTGGAGATCCAAAGGGTCCTTGGAGTCTCGATGTTCTTCATGCTCGACGTCATGCATGTGGTGCAGTCTGTAGAATGTGCAAAGAGTTTGGACAGTTACTTGTTCCTGTTTTTGGTGCCTTTAAGGAGCATGTGCAGGGTTTGTTTGTTGGAGAACTTGTCCCAATCAAAGACAGATTGACTTTGACGGAAGCTTTGGTTACTGTCAGCAACAAGCTGGGCTCAGAGAAGCAAAGTGCATTTCTTGGTGAACTTATGGATCCCATAAGGAAAATATGGTTAAGTGACAAAATGCAAAGTGGTATCTCATCTCCTCAAAATTTTGTCACATTTTTGGGGCTTGATCAAGACCCAACTTTGTCTTTTCAAAATGAGGAGTTAAAGCAAAGAAGATTTGAAGTAATGTTATGTGCCATCACCTTAATGGCCGTCGTTCGAAGCTGTGCATCAATCAATATTGAGACGGCGACCAACACAGGGCTGTCCATTGGGTCGATGCCTAATGGCACTCCTTATGTGTGCAATCCATGCGCACCCTTTGTCTTGCCACTACTCACCAATCTTATCCAGCTTGCAAAATGTATGAACAGTTTGTATGATCCTGCTGTGAAGGCTTTGATGTTTGGTGACTACCCGGCAATACTGGGCATGCATGACCTGGACAAAAGTGCAATCTATGTGTTGCAAGGACAAGTCAATGAGAAAGTTCGAGGTGATGTTGTAACTACTTTCAACCCCATTCATACTTCAAGGACCCTTTTGTATCACTTATCAGATACATGTTATCATGCATTGGGATATGCTGGTGCCTGCCTTACTCATGACTTCTACAACATATCTGGTTTGCCTCAACTCTTGGGAGATAGTATGGTCAAGACTCTTGTACATGTTCCAAACTACAGACTCAGATTTTTCTTGCGTAACTTTATGAAGTTGTTTGTCCTGCACTGCCCTGGCTATCATCTTATGAATGTTGCTATTCCAATATTGTCTCCATTCTTTTCCTATATGGTTCAGTACCTAGAAGAGCAATGGCAGATTGTTCGGCAACACCAAGCGGAAAGCAATGTGGATGAAGATGGAGAAGATGTGGAGCATAAAGAAATCATTGAAGATCAGCTGGTGTGCATTGTCAGTAAAGACTATATGGAAGTCTTCACTTTGGCATGTGTTGTGAGAAAAGACAGCAATGGAGTCACTGGAATGGAGATTACTGAAGAGGATGAACTTAGAGGTTTGGATCCTTGTAATACCAAATTGGGATCCTTGGGGACCCTTCTTCTGAGAACAGAGAGTGTTAACATGCAGATACTGTGTACAACTTTTCAATGTATGACATGGCCGGATTCATCTATTTGCCATAAAGCTTCACGTCTTGCTATGGCATTCATGAAAGAAGTCCTGGTGATATGTAGAGAGTCGGAGACGACACTGGCTGACTCAGTGGTTCAGCAGCTGTTTTACCAAGTACTGAAGGGTCTTCATGTTAATGGACAGGGACCAAGTGAGACATACCTCATCCAAACTGGACTGTCCATGTATGAGCTTCTGAGGCCTCAGTATTCATCTCTTCAGCAAGTGCTTCTTCAAACCAACTGTTCCTTGGATGATCTACAGATTTTCGAGGCCCTCTGCTTTGAAGGAAAAGAAGTTGCAGAGAAAAAAAAAAGAGAGCAATTCAGGAAACTTGTGGCAGGGATTATTGGGAAGAACATAGCTGATTTATTCAGGAATGAAATCAAGATTAAAGATCTTCCACCAATTGCGATTAACCCCACCAAGCCGGAACAAACAGAAGACCTGACTGGCCTGATGGAACTTTTTGATCCAAATAAGAGTACTGAGGTAGTGTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9HAV4	Exportin-5 OS=Homo sapiens OX=9606 GN=XPO5 PE=1 SV=1
Q924C1	Exportin-5 OS=Mus musculus OX=10090 GN=Xpo5 PE=1 SV=1
Q54PQ8	Exportin-5 OS=Dictyostelium discoideum OX=44689 GN=xpo5 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002159 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19273 all species →	Exportin-5	Exportin-5 family	Family	Interproscan
PF08389 all species →	Xpo1	Exportin 1-like protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045065 all species →	Family	Exportin-1/5	Interproscan
IPR045478 all species →	Domain	Exportin-5, C-terminal domain	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR013598 all species →	Domain	Exportin-1/Importin-beta-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11223 all species →	EXPORTIN 1/5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005049 all species →	Molecular Function	nuclear export signal receptor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006405 all species →	Biological Process	RNA export from nucleus	Interproscan
GO:0006611 all species →	Biological Process	protein export from nucleus	Interproscan
GO:0042565 all species →	Cellular Component	RNA nuclear export complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14289	XPO5; exportin-5	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.