Gene detail

Detailed information of XP_074632015.1 in Acropora palmata

Genomic Location: NC_133889.1:1374353...1394116
NR annotation: XP_015775865.1, PREDICTED: leucine-rich repeat serine/threonine-protein kinase 2-like [Acropora digitifera]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074632015.1

ATGACCGCATCAAGCCCAACATCGTCAAATGGCTATTTGCATTCACTGTGTCGTCAGGGAGATGATGTTACAATCAGAACTTACCTTCAAGGGATGGAAGACGTAAACATGTTAGAGGAAAGCCTCGGTTTCCTTGGGCACACTCCTCTTCATTCAGCCACCAGCCATGGTCAAACCAAAGTCGTAAGACTTTTACTTCTATACGGGGCCAACGTTAATGCTAAAGCTCATGGATCTTATACACCCCTTCACATTGCGGCATCCATGGATAATGTTGATTGTGTGATAGAACTTTTGGCACACAAAGCTGACGTAACTAGTAAAGACGAGTTCGATAAGACCCCTTACGATACTGCCATCATTAACAGAAATAAAAGGTCGGCTAGAATCCTCAAGACTGAAGAGGTAAAGAAAGCAGCAAGGGAAAATAACCCTGACTTGATGGAAATCTTAACGTCAATCAGTCTGACAGATGTGATCCCTTCATGCTTTAAAGAAGCTCTTCTAGAAGCATCCAGAGGTGGACATGTAGACGCTATTTGTTCATTAATTATCACAGCTGGACGGCACACTTTGCAACTAAAAAATTGTGTCATTGAAGCACTCAAGTTTGATTACTTTGAAGCAGCTGCAATGTTGTTAACGTGTTATGCAGTGAAGCATGAGAAGCGTGCACTTTTGAAATACTTGATTAGTGTAAAAGTGAGCAAAGATGAGGAACTAGAGGCTTTGTCAGAATTACCACAAGATGAGCTTATATGTGGGTCAGTTGCTAGGACAAGGTCTTTTAGTTCTGATGACAGGACATTCAGAATTGCTGTGCCAATCAAACTAGCTCTAATGCAAAAGAAAAAGGAAGCTGTTGGAATTCTCCTTTTAAATACAAAATACAACAAGGAGAAGAAACAAGTTGAGTGGTCAAGACTTGCTTTGGGTGAGATTGACCCCATTTGGATAGAAAATATCACATGGGTTGAAAAACTCAGCCTTGCATTCAATCTACTGATAAGTGTCCCTTCCAATATTTCTGTTTTGGAGAACCTCTGTCTTTTGGACTTGAGAAATAATCAATTAAAGATAGTTCCATCATGTTTACTGGAGCTTCCATCACTGCGGGAGCTCAAGCTATCTGGGAACAAGATTACAGAACTTCCTAAGGAATGTAATTGGAGCCCGTCTTTAAGATTGCTGTACTTGAGTGATAATTCTTTGCAGACATTGCCAATTACGATGGCTGAGGCAAAGTTGTCAACTTTGCATCTGGCACAAAATAACTTGTATGAAGTTCCACCTTGTGTTTGTGAGATCATTACACTTGAGTCACTGGATCTATCTGGAAATCCGAGATTAACACAACTTCCACAACAGATGGGCAGGCTGAGAAATATTCTTTTCTTGAAATTAGAGCATCTGGAACAGCTGACAGATCCTCCAGATGAGATTAAGCAAGATGGTGTTAAAACCATCATGTATTTGCGAAACACTCTACGAAACTCTAAACCCTGTTACACTGTAAAACTTATGCTGGTTGGAAGAGCTGGTCAAGGGAAAACAACGCTGATGCATCGCCTGAGGAGAGACTACACTTACAACCAAAACACTGCAACAAATGGGATTGATATTGATGAATTCCGTTACAGTCGGAATGCGTTTGGGATTTTCAACAGTTTTGCAGAGTACACGTTTCAAGTTTGGGACTTTGGTGGACAAGAAGAATTCTACACCACACATCAATGTTTTCTCTCAACTCTGGCTCTTTACCTGTTGGTGTGGAATTTGGAGGAAGGTGAAAGTGGAATTGAAATGTTGAGGGGCTGGCTTGATAACATATTTGCTACAACATCAACCACAAACCTTATCATCGTGGGAACACATCTGGATAAGGTTCGCAAAAGCAAGGAACCAGGTTTTCCAGAGCGCATGCGTCAGTTGGTGAAGGAACTGGTTGAGTTGCCAAAGTACAGTAACGGTCAAATCATTTCTGTTTACATCAAGGAAGTAAGCTGTGCATTGGATAACAGAGAAGGAATTGACGACCTTCGTAATACAATCTATGATGCAGCTTCCAACCTCAAGAAGACTGGGTTGTGTCCGGTGTCTGTGATGGGAGAAAAAATCCCCCATAGCTTTCGGCTGGTAGCAGATGCAATTCAAAACCAGCGACAGGAATTAAATGAGCAAGGAAGAACTCCAATTATGCACAAGACCGAATATGAAGCCTTAGTCCATGACATAATCCGAAATGATGATTTAGATATTGAAGATAGCAATGACCTCAGAGATGTAACTCAATTCATGCACGAGAGAGGCGTCTTGTTACACTATGATGATCCCAACCAAGATCTTCAAGATCTCTATTTCCTTGACCCCAAGTGGCTTTGCGATTTAATGGCCGGGATTGTTACCTTGCCAAATGTCAATTCCTTTATCCTAAATGGCATCTTGGATCTTAGCAATCTTTCTTTGTTGCTAAGAGGAGAGCGCTTCCCTCAGCACAACTATTCGCAGTTTATCCGTCTCTTGAACCGTTTTCAGATCGCATGCTCCCTAGACGACAAGCGAGTTCTTATTCCTTCCAAAGTCCCAGTTGAGAAACCAGCAGAAGCCACCAATGATAAGCTGCATTATGTCACCGTAAAGCGCATCCACTCTTTTCCTTGCATTCCGCATGGTTTCTGGAATCGCCTTATCGCACGCTTTTTGTTTTACGTGAAGGATATGCTGTCAACCACAGAAAACGTCTCACGGAGTGAAGCCACAAGACCCTTTCAGCTAGATCCGTTCTGTTGCCGATGTCCACTTCTTCTCGACAATTTCTCTCCGGGTGCTGTCGTAGAAGGCAGCCCTGACCTGCCAAGAGCTAGAGATGCTTCATTTAGCGGCTCTTGTGAAAATGCTTTCGACTTTTCCGCCGAGATTCCTGGCGTCCGGTATTACGGCACTCCCCGAGCCGGAGCTTACATCAACGGCAGGTTCTTTGGTGTTTCTGATGTTGAAGAAAGAACCTCTCGCAGCGATTCGGGGTATGAATACAGTTCCGACGATGACGACGAAGTTCGTAGGACTCCACTCTCTACTTGGAATGCAACTTTTGCTGCTGGATCTTCTCGTTTGTCCAGGAATAATTCATTCAGACCCAAAGAGGTATTTAAACATGGCACTCACCCAGGAACTCGCCGGGAAGACAAAGTCGATGACGTTGAATGTTCGACATGTTGCAGTGACTCGAGTTTGCCGGCCATGTCGAAGAGATTTCGACCAGATGACCTTAACTGGTCCTTGTCGTTTGCTTCTCGCGGAACAAGACCAGAGGACAGTTTTAGTAGAACTATCGAACAAGGAGGATTCAGTGCACCACGGCAAGCATCGTTACCCTGGAGGGAATTAAAAGAATTGGCGATCTCCCAGGAAACGTCTCGGATGAAAGAACTAGCGAACGGACAGTGTCTGTCTCTTAGTGATGGCAATGTCGAAAGTGCGTCTTATCATCCTGTTCACCCCAGCTCTGATTGGTGTTCGCGCGAAAATGAAGATGCTCTTATGGGTCCTTCATTCGCAGGGCCACCCGCAGGCGGCGAAATGAGCACCTCTCTGGAAGATCTCAACGTTGGCGTTCTTCCATCGTTCGAAAGGTCTTGTTCAACGGCCACAGACGAGTCTACAAGTTATGATAACACATTACATTTCTCTGCATCGGGGAGTGAGCAAGAAACTAGCTGCAATGGTTTTGATAGTTTTGAAAAGCAAGAAGTGGGATGGGATGAGACAGACGAGAATATGGAAGAGGTACAGCCGCTTCGGAATGAAGAAGAGAAAGTTACAGGAGTCAGCCATTCATCGGACTTTCCACATCCTGAGCAGCAAGAAGCTCTAGAGCCAAGTGCAAGCAGCCGGTCGGACCCGCTATTCCATGGGGTGCCTGTAGAAGATATGCCTACTACCTCACCACCAACAATATCATGCTGTGATGGTGACAGCTCTCCACACCTCCCTCACTGCCCATTGATCAGGGACTTCTCAGTCGAAACGTTGCCCCATCTTCCCACAGATCTGGCGTCTCTAATCGATCAGGGTTTTCTTCATTGCTGGAAATCCGGTGTTTGCTTGCAGCATCCTCGTTTGTTTGTTCTCCTCAGCTGTTCTCCTGATCCTAACGATCCCGATCGAAACTTGGTCGTTACTGAAGTAAGTCCCTGCCAACAGGGCCGCAAAGTACTGAGTTACGTAGTTGATCACATTGATACACTTGTGCGCGAATGGCACCAAGAACTCGCCAACACAGATGGGTACCAACCGAAAGTCAGACAACTAATTCCTTGCTTTGTGTGCGAGCGTTTGGGTCTTGAGCCTCACAACTTCAAATTTGTTCAATGCCAGGAACAAAGTTCCAAGGCAGACACGATTTGCTGCCCAAAACACCCACGTCTGCAGGTCGATTTGCATCAAGTGGTACCTGATATCATGTTCCATGACGTAGATGCAGATTTGTTGTTGTCACACGACGGTATCTCATACGAGGACACTGATGGTAACATTCTGGGGTCAGGTGGCTACGGAAAGGTTGTTCGTGGTCAGTACAAGGAGCGCGCAGTTGCCATCAAGTTCTACAAAAAAGATATGATTGATCCTTTAAGACATTACCGCGAGGTTCGTAAAGAGCTGAATGTATTACGCCGGGTACGACACCATCCTTTCCTCATCAGCGTCATCGGTGTAACTCTTCGTCCTCTGTGTTTAGTTCTTGAACTTGCAGAGGGTGGCACACTTATGTCAATCTTTCAGCGAGGCGACTCTATAAACCGCATCGTGTTGTTTCGTATTGCGTATCAGATTGCCGAAGCGTTAAGGTTTCTTCACGCCTTGGGGGTTATTTATCGCGACTTGAAACCGGAAAATGTGCTTGTCTGGTCGTTGAAGGAGCAGGATGACTTGCATGTGAAACTCATCGACTTTGGCACCGCCAACTTTGCGACGTCGACCGGGCTCGTTTCTGTCACAGGCACACCTGGCATTCACGCACCTGAGATGCTGGAATGCGCCAACAAGGAAGAATACACTGCTCAAGTCGATGTGTATTCGTACGCAATTCTGTTGTATAAGCTCATTACCCGTTTGGTGCCATTTGAAGAATACGATTCATTGCCCAAAATCAACGCGGCTGTGATAAGTGGTGAGCGGCCCAAGTGGAGAGAGGTTCCAGTGGCAATGATCGGCCTTCCGACTCTGACGGAGCTAATGCTTCAGTGCTGGTTGTCCAGGCCGATGAGTAGACCGACGACTGCTAAGATAGTGGAACAGGTCTGTCAGCCAGCGTTTCAATGTTTGTTCGCCAAACAGCCCATTCCTTCAGTTGACCAATCGGTGCGCCATGTTTGTCTCGTTCCAACGTCTCGCGAAGTGTGGCTAGCTTGCGATGGTCATCCTGGGAACAAGATTTTTATCTACGATGGTCGCTCTCTTGACTTGAAATTTTCCTTCCCCATCAATTCGTACCAAGAAAAGGATTGCTCCTTCCAGATTCAATGCATGCATTTCATGGCGGCACACGTGTTGATTGGCGTCCGTGGGACTTTCGACTTGGTTTTTGTCTACTCTGCCTCGGGTACATCGCACTATAAATTAGTGACAACACTCGCCTTCAATGAGCAGGTAACGAGTGTCACGTCAAATGACGAATACATCTTTGTTGGTCTCAACGACGCGAGAGTTCGCTGTATCCTCAAATCAGAAATGAAAAAAAGTGATAAAAAGAGAGGTGATCGCTCTTTTAAAGTTGGTCGCCATCGCATCTTATCCATGGTGGTTGTTCAGGATAAACTTTGGGTGTCCTCGAGCCGGTATATTTTCCGATATTTCACCAAACCAGGTGAAGTGGAAGCATTTGAGGCAGATGCCATGTGGTATGGGGGTCCGGAGGGCATGGAAGACAACCCACAGACTAAGGTGTCCTTACTGAAGTCATCTTTGGACGAACAAAGCGTGTTCTCTGTTTGCAGGTCACTTCTCAGTAAATGGGATGTCACGGGTATAAAGAAACACCACAGCGTTGATTGCGCAACCATTTTGCATGCCTTGAATGTCACCTCCACCGAAATAGTACCCCAAGACAGCAACGATGCTTCTGCTTGTATCACATGCGTGGAACTCACGCCAGATACCGTCTGGGCTGGAACCGCCAGTGGCCATATCCTGATATTGGATGCCCTCACTGGTCATCTAGTCACGTGGTTTCATTCCTATGAAGAAACACGCACCCTGACTTTCATCCAGGATCCCGGACAAACTGGTACCGAACAGGGTTATGTCATAAGTACCGGTAAGGGCTTGAGGCGAGAAGGGCTTGGAGCGAAGGGCGTCTGTATCTTATCACCCGAACGGGTGTGGGCCCCACCGGAAATCAAGAGGAGAGTGAGTGAATCCAAAGGGAAAACTTTTGGTGTTAGGAAGGTTCGCTCACCTACGTCGCCATGCGATGACCCTAACGCTGCTGATGAACCAAGTGCCAGTGTCTCACCATGCAAGTGTACTATGATCATGTGGGAAGCGGTTTCCAAAGAATGCTTCGCGAGAATTGAGGCCAAAAGTGGTCGGAAACGTTATTGTGGTGATAGTGCTGACAAGGCTTCATGCGAGGATTACAATAATTTTAACAGAAGCACAGAAGAAAATCTCCCCCAAAACTGTGAAATATAA

Protein

XP_074632015.1

MTASSPTSSNGYLHSLCRQGDDVTIRTYLQGMEDVNMLEESLGFLGHTPLHSATSHGQTKVVRLLLLYGANVNAKAHGSYTPLHIAASMDNVDCVIELLAHKADVTSKDEFDKTPYDTAIINRNKRSARILKTEEVKKAARENNPDLMEILTSISLTDVIPSCFKEALLEASRGGHVDAICSLIITAGRHTLQLKNCVIEALKFDYFEAAAMLLTCYAVKHEKRALLKYLISVKVSKDEELEALSELPQDELICGSVARTRSFSSDDRTFRIAVPIKLALMQKKKEAVGILLLNTKYNKEKKQVEWSRLALGEIDPIWIENITWVEKLSLAFNLLISVPSNISVLENLCLLDLRNNQLKIVPSCLLELPSLRELKLSGNKITELPKECNWSPSLRLLYLSDNSLQTLPITMAEAKLSTLHLAQNNLYEVPPCVCEIITLESLDLSGNPRLTQLPQQMGRLRNILFLKLEHLEQLTDPPDEIKQDGVKTIMYLRNTLRNSKPCYTVKLMLVGRAGQGKTTLMHRLRRDYTYNQNTATNGIDIDEFRYSRNAFGIFNSFAEYTFQVWDFGGQEEFYTTHQCFLSTLALYLLVWNLEEGESGIEMLRGWLDNIFATTSTTNLIIVGTHLDKVRKSKEPGFPERMRQLVKELVELPKYSNGQIISVYIKEVSCALDNREGIDDLRNTIYDAASNLKKTGLCPVSVMGEKIPHSFRLVADAIQNQRQELNEQGRTPIMHKTEYEALVHDIIRNDDLDIEDSNDLRDVTQFMHERGVLLHYDDPNQDLQDLYFLDPKWLCDLMAGIVTLPNVNSFILNGILDLSNLSLLLRGERFPQHNYSQFIRLLNRFQIACSLDDKRVLIPSKVPVEKPAEATNDKLHYVTVKRIHSFPCIPHGFWNRLIARFLFYVKDMLSTTENVSRSEATRPFQLDPFCCRCPLLLDNFSPGAVVEGSPDLPRARDASFSGSCENAFDFSAEIPGVRYYGTPRAGAYINGRFFGVSDVEERTSRSDSGYEYSSDDDDEVRRTPLSTWNATFAAGSSRLSRNNSFRPKEVFKHGTHPGTRREDKVDDVECSTCCSDSSLPAMSKRFRPDDLNWSLSFASRGTRPEDSFSRTIEQGGFSAPRQASLPWRELKELAISQETSRMKELANGQCLSLSDGNVESASYHPVHPSSDWCSRENEDALMGPSFAGPPAGGEMSTSLEDLNVGVLPSFERSCSTATDESTSYDNTLHFSASGSEQETSCNGFDSFEKQEVGWDETDENMEEVQPLRNEEEKVTGVSHSSDFPHPEQQEALEPSASSRSDPLFHGVPVEDMPTTSPPTISCCDGDSSPHLPHCPLIRDFSVETLPHLPTDLASLIDQGFLHCWKSGVCLQHPRLFVLLSCSPDPNDPDRNLVVTEVSPCQQGRKVLSYVVDHIDTLVREWHQELANTDGYQPKVRQLIPCFVCERLGLEPHNFKFVQCQEQSSKADTICCPKHPRLQVDLHQVVPDIMFHDVDADLLLSHDGISYEDTDGNILGSGGYGKVVRGQYKERAVAIKFYKKDMIDPLRHYREVRKELNVLRRVRHHPFLISVIGVTLRPLCLVLELAEGGTLMSIFQRGDSINRIVLFRIAYQIAEALRFLHALGVIYRDLKPENVLVWSLKEQDDLHVKLIDFGTANFATSTGLVSVTGTPGIHAPEMLECANKEEYTAQVDVYSYAILLYKLITRLVPFEEYDSLPKINAAVISGERPKWREVPVAMIGLPTLTELMLQCWLSRPMSRPTTAKIVEQVCQPAFQCLFAKQPIPSVDQSVRHVCLVPTSREVWLACDGHPGNKIFIYDGRSLDLKFSFPINSYQEKDCSFQIQCMHFMAAHVLIGVRGTFDLVFVYSASGTSHYKLVTTLAFNEQVTSVTSNDEYIFVGLNDARVRCILKSEMKKSDKKRGDRSFKVGRHRILSMVVVQDKLWVSSSRYIFRYFTKPGEVEAFEADAMWYGGPEGMEDNPQTKVSLLKSSLDEQSVFSVCRSLLSKWDVTGIKKHHSVDCATILHALNVTSTEIVPQDSNDASACITCVELTPDTVWAGTASGHILILDALTGHLVTWFHSYEETRTLTFIQDPGQTGTEQGYVISTGKGLRREGLGAKGVCILSPERVWAPPEIKRRVSESKGKTFGVRKVRSPTSPCDDPNAADEPSASVSPCKCTMIMWEAVSKECFARIEAKSGRKRYCGDSADKASCEDYNNFNRSTEENLPQNCEI

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5S007	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens OX=9606 GN=LRRK2 PE=1 SV=2
Q5S006	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2
Q3UHC2	Leucine-rich repeat serine/threonine-protein kinase 1 OS=Mus musculus OX=10090 GN=Lrrk1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001655 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477 all species →	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF19056 all species →	WD40_2	WD40 repeated domain	Repeat	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF16095 all species →	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR020859 all species →	Domain	Roc domain	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR011047 all species →	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR032171 all species →	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050167 all species →	Family	Serine/threonine-protein kinase	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23257 all species →	SERINE-THREONINE PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_074632015.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.