Detailed information of XP_074632078.1 in Acropora palmata

Genomic Location: NC_133889.1:885501...893754
NR annotation: XP_029189561.2, protein YIF1B-like isoform X2 [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5U3G6Protein YIF1B OS=Danio rerio OX=7955 GN=yif1b PE=2 SV=2
Q9CX30Protein YIF1B OS=Mus musculus OX=10090 GN=Yif1b PE=1 SV=2
Q6GN58Protein YIF1B-A OS=Xenopus laevis OX=8355 GN=yif1b-a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003891 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03878
all species →		YIF1YIF1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005578
all species →		FamilyYif1 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14083
all species →		YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005789
all species →		Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006888
all species →		Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0005793
all species →		Cellular Componentendoplasmic reticulum-Golgi intermediate compartmentInterproscan
GO:0030134
all species →		Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan
GO:0030173
all species →		Cellular Componentobsolete integral component of Golgi membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20362YIF1; protein transport protein YIF1-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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