Gene detail

Detailed information of XP_074632083.1 in Acropora palmata

Genomic Location: NC_133889.1:21982763...22011656
NR annotation: XP_029189284.2, E3 ubiquitin-protein ligase UBR2-like [Acropora millepora]
Species Acropora palmata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_074632083.1

ATGAGTCAATTTGAGACGAGTGAAAGCCCAAAGGAGGTGTTCGGTGAACTTGGAAAACGATGGATAAAGCAAGTGAAGATTACGAAGGACTTTCGAAGTATTTTTATGAGACATCTTTCGGATTTTGCCTCTAGATGCTTCGAGGTTTACTCAGCTCCAAATCTTAAAGCCGCTATCAATGAAGAAAAATGCCAGAGAATTATTTTCACGGCTTTGGAGTACTTTCTGTGCGGCGAGGATCCCATCGTTGGTTTCCAAAAGCTTCTCAACGCTAACTCGCCGTCACAGCTGTGCGGGAAAGTGTTTAAAGTTGGGGAACCAACGTATTCTTGCAGAGACTGTGGTTATGACAATACATGTGTTTTGTGCATTAATTGCTTTCAAAAGAGCATTCACAAGAACCATCATTACAAGATGAACACCTCGGCGGGAGGCGGAGTATGTGATTGTGGTGATGTAGAAGCATGGAAAGAGGGTGAGGCATGTGAGATCCATCAACAGGGACAAGATGTTGACATGGAAGAGGATCCAATTGGCAAGTTACCTCTTGATATTGTGGAGCGTGGAGTGGCTTTGTATGATGCTGTGTTAAACTACTGTATTGACCTTATTTGCTGGGAGAAGACAGATGAATTACCTGAGTATCTTGATGTCCCATGTATTCCAGACACCTTTGCCACTGTCTTGTTTAATGACGAAGTTCATACTTATGAAGAGGTTATAAGAACACTGCAACTTGCAATACCTGATTGTACTCAAAATCAAGCCTTGGCATTTGCAAATACTGTAGATAGAGAGGGAAGATCGGTTGTCAGAACAGGGAGTTACAGTCAATGTGAACAATCCAGGAAAACTATTAAGCAAGGTACATCTGGTCCTAGCCGCAAGCCACTCAAGTGTCGTGTGATGCATCACAAAGTTGTGGCACATCAAATGTGTGCTGTGCAGATGTTGGGTTGGTTAAGCAAGATCACAAACTACTCAGATGGATTCAGGAGAATTCTCTCCAACACAGTTCTTGCTTTCAAGGAGGGTCCTGATCTTCTTAAGCGGGTTCTTCTAGCTGATTCCAGTTTGTGGAAAGTTGCAAGAGCTCACACGCAAAAATTGTTCATTAACACGATGTTGATGGATCCTGTGGGGAAGAAGGCATTTGCAGTTCACTTTACAAAGAATTATTGTCAACTTTATAAAGACTTTGTGGATGATGATCATGAGCACAGTGTTTCAGTGACATGCCTGTCTGTTCAACTCTTCACAGTTCCTACATTGGCAAGAATGTTGATATTGGAACAGGATGTCTTGGAAGTGATCATTTTCTCATTTATGGACCATCTGAGGCCTGCCATCAGTGAAAAAGGAACATATGAGTTTCAGAAACAATCCCCGATTAAACTTAAGAGGGCCTACTTTATGTTGGTTGACCTCAAGTACATTCTACTTCACAAACCCGCAGAATGGACTGATGAGCTCAGGGGAAAGTTCATGAAGTTTTTGGACAAGTTCTTTTATCTCCTTAACTGCATGCAAGGAATGCATATGACAACTCGCAAGATAGGGCGACATATTGAGACTGAGCCTGATTGGGAAGCATCTTTCACGTTACAATTCAGGGTCACACCAGTGATATCTCTTGTCTGGGATTGGTGTGCAAGTGATTTATTAGTCTTCAAAAGTGCAATCCTGAAGACAATCCAAACTCTTCGTGAGTCAAGAAAAAAGTTGCCAGAGGAGAATGTTACGCACTTCCAGGAATTATGTGGGCGTTCCTTCAAGTTGTTTAAGTATGATGTATCAAGTTACCCAGTGTCTGTTCATTTACCAGTTACACGATTTCTGTCAGGTCTTCTCTTATCTTCTGATAAATACAAACTTTCTTTTCGGGAATTGTTTGGATTTGACACTGAGGATGATGGTCTTCAACTATTTCTGTTGGAGTATCCTCTCCGCACACTTGTGATGGTGGCTCAAGTTCAGGCTGGAATGTGGAGGAGAAATGGATATGCAGTAATAAATCAGGTCTACAACTACTTAAATGTGAGAGGTCGTTCAATCATGTTTGACAAGGATGTGGTTATGCTTCAGGTTGTGGCTTCTTGTTTAGACAGTGACTACTTCATAGCGGCTTTGCTTGACAAGTTTGGGCTTGTGGAATGGTCCAAGCCCGACTTTAATGATAGCAGATATGACCAGGAGAAACTCAACCAGAAGATGACGATTGCAGAGTCTTTTATGTCCATGCTAATTGCGGTTATTGGTGAGCGATATTCCCCTGGCATTGGTTGTGTGTCAACCAATGAGTTCATGAGGCGCGAAATCATTCACAAGCTCTGCCTTCGTCCCATGACGCATAGCGAGCTTGTCAAGGCACTTCTTTCGGACAGTGAGCAAGAAGGCGATGAGTGCATCGATGCCATCATTGACTCAGTTTCGACATTCAAGAAGCCAGGGGTCACTGGGCGGGGTCTCTATGACCTCAAACCAGAATTTATGAAAGAATATAATCCATTTTTCTATCACTACACACGGATTGAACAGTCCAAGGCTGAAGAGCATCTGAGAAAAAGAGTAAGAGGCGATGATGCAAAGGCTGGTGGTGGTCCCCCACCCGCACCCCCTGAATTTTGCAGGCCTTTTAGCAAAGTGGTGAACCTGTTGTGTTGCAAGACGCTTGTGAGTCTGATGAACACTCTATTACGACGCAACACTTCTCAGCCCAAAGCTGTAACTGATTTACTAATCCAACAGGTTCTTCATTTGACTTGTCTTGCTCTTTACGAAGAAAAAAGGCGACGGGTGATTAACGGAGGGGATGAATTTAAATTTATCACTGCTGCAACTGCAACAGATGAACATCCTCAGAGTCTTGTCATGTCACTCCAGATTCTTCACGATGGAGCTGAGACATGCAAGGAACATGCGGCTTTGCTGGACTGGATCGTTAAGACTTTACACGAGGAGCTAACAACGCACCAAGAGAAGCACCATGAGGTGTGTAGAACTCGCCCCTCCCTAGAAAGGATCGTTTCCCAAGAGGAAGAAAAGGCGAAAAAAGCCCGGATGGCACAGGAGAGGCGCGCTAAAATCATGGCACAAATGTCCGCTTTGCAGAAGGCATTCATCAAGGAAAATGGAGAGTTACTGGCATCCATGGAAACGGATGACAATAACTCTGCGGAGTCACATCACATGGTAACCAGTGCGAACTGTTCACAACAGGAGCCTATAGTTCTTGGGGTTCAGCGGTGTCAGCAAGAAGTAGGAACACCTCGCTATGTAACCGAGCCTTGTATTTTGTGCCAAGAGTCACAGGAGGTTAATATCGATGGACGAGCTGTGGTTATGGCGGCCTTTGTTCAGAGGTCGACCGTGATGTCCCGTTCCCGCGGAAAGATGTTCGAGGATGGTGACAAGCTTGACCCGCTGTACGCCCCAAGTGACCAGTACTGGGGGGTACATGTCAGTAGCTGTGGCCATATGATGCACAGTGACTGTTGGCAGGGATTTTACAAATCTGTAATCGCAAAGGAACGAAGAACTCTGCGTGTGGTGCATTATTTCAGCGTGGATATTGCGAGGAACGAATTCCTTTGTCCACTGTGTGGATGTATCAGCAACACAGTCCTACCAATCATGCCAGCTTTGTTCAACGCACAAGGAGAGGGCTGCACTGAAGATGTGACAATTGCAGAATTTCTGAGCAGCGTTCAAAATGAAGTTTCATCAAACCTCAGATTATTTTGCAAAGATACCAAGAAAGGAAAGAAAGCTTCAGCTACAGTCTCTGAAAGTTTCCAAGCAGTGTTTCGAACTCTTTTAAAAACAGGGACAAAATTCTCAAATGACCTGAAGGCAATGATGAGGGTCTTCGCACAGGCTTGTTTCATGGTTGGCCTAGGAGTTGACCCCAATGAAGAGGACAGGCGTGTCCCTGTGCTGGTGTGGAAAGCCTGTGCTTACACCATTCAAAGCGGAGAGAGTTCTGCAAGAGCAGAGGGAAAGGCTGTCTTTTCAGGACTTGGATCTCGAAAGTTTCAATGTATGGCAGCTCTTACTCGTCAAGCTGCCGTCATTTCAGGATTGTTTTCAAGCAATGATGTTCAACAGTATTGTCTAAGATTGTTATCAGTCCTAACCCCAGACGCGGTACCAGGTGCTGATGGACCCTCGCTGTTGGATTTGGATTTATTCAGTCTGCTGGTTATGCTCCGCCTGGTCTTACCGAGCATGTTATATCAAGAATCTGTTGACAAACGTGCGAAGCCTGCGTTGAAGAATATTATTGGATTGAATTCTCCAGTGTTTATGGATCAATGTGTGTTTCGAGTCACTCTGGTTATGCGGATTGTTCAAATACTTCTCACGGCATCATCTGACCTTGCAAATGAAGGCTCAGGTGATGAATCAATGCAACAACACGACCCTCCACATCAGAGTGAGGCTTTCAACTTGGCTGCCTTGTGGGGAAAACTGAGACACTGGGCCGGTACCCAATCCTCCTCTGCACACCCTATGCCACAAGCTCTGCTGGATCACGTGAAAGTACAGTTGTTGCCATTCCTCCGATGTTCAGCTTTGTTCTTTCACTTCCTGACCGAGATCCCTGGACCGGCGGTGCTGAAAGGGCCCAGCTCGCCATCGTTGACGGAAGAATTGCTGAGCTTATGCGGGTACCTTTCAGTTCCTTCAGACATGACGCGCCTGTTCCAGTGGAATGAGGATAGTGGGTGCATTAGCTCCTCCGTTATCTCTTCTACCGTAAAACGATGGTGCAGTCACGAGCACACGAAAAGAACCTTAGCGACCGCCGGAGTGGAGTCACTTGGATACTCAATCGAAGCCAATCGCTTGATGAAGATTCCAGTGGATTACAGCGAGCTCATCCACGAAGCTTCTTTGTTTACGTGTCCAAATTCAGACGGTGATGACAGCAGAGCGCCTGCCTTATGTCTCGTCTGCGGCGCAATGCTTTGCTCTCAGAGTTACTGTTGCCAAACTGAAGTTGAAGGAGGGGAAAAAGTGGGAGCCTGTGCCGCGCATGCCCAGAAATGTGGTGCTGGCGTGGGTGTATTTTTGCGCGTGCGCGAGTGTCACATTCTTCTAATGGCCAATAAAAACAAAGGGTGCTTTTATTCCCCTCCATATTTGGATGCCTATGGTGAGACAGATCAAGGACTGAGGCGTGGTAATCCTCTGTATTTATGCCACGAGCGATATCAGAAGCTGGAGAAACTGTGGCTAAACCATGCAGTCGCGGAAGAAGTAGCTCGATGCCTTGAGTCCAACAGAAATTTGTTATCAATTGATTGGACAAACCTGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IWV8	E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens OX=9606 GN=UBR2 PE=1 SV=1
Q6WKZ8	E3 ubiquitin-protein ligase UBR2 OS=Mus musculus OX=10090 GN=Ubr2 PE=1 SV=2
Q8IWV7	E3 ubiquitin-protein ligase UBR1 OS=Homo sapiens OX=9606 GN=UBR1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003166 (this species only)
Ubiquitin family	E3\|E3 activity\|N-domain · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 activity RING\|RING · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 activity\|UBR-box · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02617 all species →	ClpS	ATP-dependent Clp protease adaptor protein ClpS	Family	Interproscan
PF18995 all species →	PRT6_C	Proteolysis_6 C-terminal	Domain	Interproscan
PF02207 all species →	zf-UBR	Putative zinc finger in N-recognin (UBR box)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003769 all species →	Domain	Adaptor protein ClpS, core	Interproscan
IPR003126 all species →	Domain	Zinc finger, UBR-type	Interproscan
IPR039164 all species →	Family	E3 ubiquitin-protein ligase UBR1-like	Interproscan
IPR042065 all species →	Homologous_superfamily	E3 ubiquitin-protein ligase ELL-like	Interproscan
IPR014719 all species →	Homologous_superfamily	Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR044046 all species →	Domain	E3 ubiquitin-protein ligase UBR-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21497 all species →	UBIQUITIN LIGASE E3 ALPHA-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030163 all species →	Biological Process	protein catabolic process	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0071596 all species →	Biological Process	ubiquitin-dependent protein catabolic process via the N-end rule pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_074632083.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_074632083.1 across 84 RNA-seq samples of Acropora palmata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

84Samples

81TPM > 0

2Conditions

72.3Max TPM

48.2Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
all_coral_tissue · exposed	46	44	45.40	71.67
all_coral_tissue · baseline	38	37	51.53	72.30

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR8800086	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	71.67
SRR8800105	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	71.47
SRR8800042	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	69.61
SRR8800077	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	62.79
SRR8800100	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	61.89
SRR8800097	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	59.80
SRR8800066	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	59.02
SRR8800093	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	58.59
SRR8800087	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	58.28
SRR8800068	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	58.12
SRR8800094	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	55.86
SRR8800099	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	55.55
SRR8800045	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	54.44
SRR8800092	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	53.87
SRR8800039	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	52.87
SRR8800080	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	52.74
SRR8800051	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	52.62
SRR8800036	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	52.43
SRR8800083	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	51.42
SRR8800071	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	49.08
SRR8800038	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	48.38
SRR8800073	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	47.34
SRR8800034	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	45.23
SRR8800091	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	44.04
SRR8800062	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	43.18
SRR8800089	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	43.05
SRR8800065	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	42.98
SRR8800040	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	41.85
SRR8800088	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	41.10
SRR8800028	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	40.61
SRR8800079	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	39.99
SRR8800044	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	39.88
SRR8800063	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	39.26
SRR8800047	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	38.97
SRR8800060	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	37.76
SRR8800053	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	37.31
SRR8800061	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	36.51
SRR8800095	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	36.09
SRR8800058	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	35.95
SRR8800107	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	35.66
SRR8800026	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	32.41
SRR8800033	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	29.69
SRR8800029	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	25.23
SRR8800027	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	23.65
SRR8800056	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	0.00
SRR8800075	all_coral_tissue · exposed	all_coral_tissue	not recorded	exposed	SRP189781	0.00
SRR8800067	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	72.30
SRR8800043	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	70.05
SRR8800069	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	69.13
SRR8800041	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	67.89
SRR8800048	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	67.87
SRR8800057	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	67.46
SRR8800106	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	66.59
SRR8800078	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	64.11
SRR8800096	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	63.89
SRR8800072	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	62.24
SRR8800035	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	61.65
SRR8800101	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	60.62
SRR8800090	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	60.44
SRR8800098	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	56.28
SRR8800109	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	55.12
SRR8800103	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	53.17
SRR8800032	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	51.98
SRR8800054	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	51.90
SRR8800046	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	51.84
SRR8800076	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	51.31
SRR8800074	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	51.17
SRR8800031	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	50.54
SRR8800037	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	48.43
SRR8800049	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	47.95
SRR8800108	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	47.23
SRR8800085	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	47.04
SRR8800050	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	46.61
SRR8800104	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	46.12
SRR8800081	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	44.17
SRR8800059	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	43.45
SRR8800102	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	42.30
SRR8800055	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	41.23
SRR8800082	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	40.33
SRR8800064	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	36.29
SRR8800084	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	34.63
SRR8800070	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	32.53
SRR8800030	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	32.37
SRR8800052	all_coral_tissue · baseline	all_coral_tissue	not recorded	baseline	SRP189781	0.00

Source: CnidoSite RNA-seq expression matrices (APALM_TPM, StringTie quantification over 84 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.