Detailed information of XP_074633909.1 in Acropora palmata

Genomic Location: NC_133890.1:19390486...19404402
NR annotation: XP_029187385.2, steroid hormone receptor ERR2 [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RAM2Estrogen-related receptor gamma OS=Pongo abelii OX=9601 GN=ESRRG PE=2 SV=1
Q90416Retinoic acid receptor RXR-gamma-A OS=Danio rerio OX=7955 GN=rxrga PE=2 SV=2
P62508Estrogen-related receptor gamma OS=Homo sapiens OX=9606 GN=ESRRG PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009045 (this species only)
Transcription factor familyESR-like · all TF in this species
Transcription factor familyMiscellaneous · all TF in this species
Transcription factor familyNGFIB-like · all TF in this species
Transcription factor familyRXR-like · all TF in this species
Transcription factor familySF-like · all TF in this species
Transcription factor familyTHR-like · all TF in this species
Transcription factor familyGCNF-like · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00104
all species →
Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan
PF00105
all species →
zf-C4Zinc finger, C4 type (two domains)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000536
all species →
DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR001628
all species →
DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR035500
all species →
Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan
IPR013088
all species →
Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR050200
all species →
FamilyNuclear hormone receptor family NR3 subfamilyInterproscan
IPR001723
all species →
FamilyNuclear hormone receptorInterproscan
IPR001728
all species →
FamilyThyroid hormone receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48092
all species →
KNIRPS-RELATED PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →
Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0043565
all species →
Molecular Functionsequence-specific DNA bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000790
all species →
Cellular ComponentchromatinInterproscan
GO:0004879
all species →
Molecular Functionnuclear receptor activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0034056
all species →
Molecular Functionestrogen response element bindingInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_074633909.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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