Gene detail

Detailed information of XP_074634191.1 in Acropora palmata

Genomic Location: NC_133890.1:1089857...1092791
NR annotation: CAH3164667.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_074634191.1

ATGCATATATGCCATCACTATTTAGTTACAATGGATTCTTCGGAAAGTGAACGCGTCCCTTCGATTGAGGAGCTTTGTAGGAAAATCCCAATATTGTCGGAGTATTGCGTAAAACTCGAGGACAGCGTAAAACGAAGATATTTAGAAAAAATCGCCGAAGTTGGAGTCGATCCGGTCACCATTCCCGATCAACAGTTTGACACGGAGTGCCTTCCTCCCATCGAAGCGATGGATTTGTTAAGCTACTTGGTTTTGGAAACAAGTTTCTACACCAAAGAGCAGTTTAAAGCCTACAAGAGTTTAGAGGCCTACAACTTTCTGGTGTCAGGATTTCTAACAAGTATTCAAGGTTGCATTGTCGCTGGTAAGCACATCGTCACAGGAAAAGTGAGACATTCCCAGAGAATGAATGACGCTTTGATCTCTGTCTGGATATTAGCCGAAAAAGATGGAACAGTCAGATCAGCTCACTGCGTAGGATGCAAAGCAGGACTCTCAGAATCGTGCTCACACGTAGCAAGCGTGTTGTTTTACGTGGAAGCTTGGACAAGAATTCGAGGTCAGTTGGCTTGCACACAAGTGAAATGCTCGTGGCTTTTACCATCATTTGTGAAAGACGTTCCATATGCTAGAATGCGGGACATAAATTTGGCCTCCGCCAGAAAACTGAAAGCGGATTTAGATAAAACAATCGATAGCTTAAGCGAAAACAGCGAGGCTCAGGCAACATTCTTCACCGCCAGCAGAAGAGAACTAACAGTGGACGTTCCCACAGAAGCTGAAATGGACACCTTCTACAAAAGTTTAGACAGATCAAAAATTAAACCGGTAGCATTAAGTCTTATCAAGCCCTACTCTGACCAGTTTGTATCAGAAAGCAGCAGTATCTTAACAATCCCAGACCTTTTTGACAATGACAATTTAAATCTGTCCTACACTGATCTGCTAAAGAAGTGCTTTGATGTTGAAATTTCTTTGTCAAGTGAAGAGATTTCACAAATTGAAAGAGATACACAAAGCCAGGCAAATGGGTCTGCATTTTTTCGACATAGAGTGGGTCGTATTGGTGCATCGATGAGTGGAGCAGTCTGCCGTACAAACCCTGCTCAACCATCACAGTCACTGATCAAATCAGTCTGCTATCCACATTTATTTAAAGTGAACACAAAAGCAGTGTTTCATGGGTGTAAACATGAAGCTGATGCGATTAAAGCCTATGAAGAAGAAATGAAAAACAGTCATGCTGACTTAAAACTTTCGCGGTGTGGATTAGTTATTAACGAAGAGTATCCTTGGATTCATGCCACTCCCGACTTCTTGGTATCTTGCACATGCTGTGGACTGGGATGTGGAGAAATCAAATGTCCAATATGTATTGACAGAAGTGATTTTGACAGTTATGTTTTAAAGAAAAATTCTTGCCTGGAAAAGGTAGCTGGTAATTTTCAACTGAAACGAAACCACAACTACTTTTTTCAAGTTCAACAACAGCTTTTCACATTACCAGAGCGAAAGTGCAATGACTTTGTTGTTTGTGCGTTTGATAGTTCTCACCGTGCAACAATTGTTAAAGAAAGAATTTACCCTGACCATGGTCACTGGAAGGTTGTTTTCCCAAAACTTACCACTTTCTGGAGAACATGTGTTTTGCCTGAAATTTTAGGTAGATGGTACTCAAGAAAGTGTGACATTTCTGCTGAGATACCTCAAGCAGGTGATGGAATTTGCTTTTGCAGAATGCCATCAGATGGAAACACTGTGAAATGTGGAAACATTCAGTGCCCATTTGTTGAATTTCATCCATCATGTTTGGCAATCTCAACCCCACTTCCAAGGTTATGCACTGCTGTTTCAACTGGGACATGCCAGGAAAACCCAGTCGCTACTACCACTTGTTCTTCTCAATCTCATCATGATAAACCCAAGTTGTATGAATCTGACAATGCACATGATTCTGACAGTGATGAGGAAAGCACTGATGACATTGAGGTTACTATGGTAACAACGTGTGACTCTGAACGACATCGTTCACTTGGAAATCTTGATGAGCAAGATTATCAGCTTATTATGTCGCCCCATGGTTGGCTTGATGATGCAATTATCCATAGTGCACAGGTGCTTTTGCAGGAAATAAACCCTTTAATTGAAGGTTTCCAGCGACCTACATTAGGTCCAGTGCGAAATTTTAGTGTAGTTTCTGGCGAATTTGTGCAGATATTGCATACAGGACAAAATCACTGGGTTTGTGTCAGCTCAGTAGGATGCATTCCTGGAACAGTAACACTCTTTGACAGTCTCTATCATGACATAATCTCTCAAGAAGTTGAAGATCAGGTCAGAAACCTATTAGCACACAACTTCCAGAAACTAGAGTATGCACCCTGCCAACAGCAAACAAATGGTAGTGATTGCGGGGTTTTTGCTATTGCTTTTGCAACAGCTCTTGTGTTCGGATCTCATCCACAAAACCTAAATTTTGACGTTGCAAAAATGCGCCCACATTTAGTGACCTGTCTTCGAGCTGGTCAGATGTCTCAATTTCCATTGTTTTAA

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	DUB\|ULP\|ULP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09588	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan
PF02902	Peptidase_C48	Ulp1 protease family, C-terminal catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR019080	Domain	YqaJ viral recombinase	Interproscan
IPR003653	Domain	Ulp1 protease family, C-terminal catalytic domain	Interproscan
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47526	ATP-DEPENDENT DNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan