Genomic Location: NC_133891.1:18282137...18284665
NR annotation: XP_044174171.1, E3 ubiquitin-protein ligase TRIM71-like [Acropora millepora]
Species abbreviation APALM · all data for this species · gene families
| CDS |
| XP_074635190.1 |
| Protein |
| XP_074635190.1 |
| UniProt accession | Description |
|---|---|
| Q5BIM1 | E3 ubiquitin-protein ligase TRIM45 OS=Bos taurus OX=9913 GN=TRIM45 PE=2 SV=1 |
| D2GXS7 | Tripartite motif-containing protein 2 OS=Ailuropoda melanoleuca OX=9646 GN=TRIM2 PE=3 SV=1 |
| A4IF63 | Tripartite motif-containing protein 2 OS=Bos taurus OX=9913 GN=TRIM2 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000199 (this species only) |
| Ubiquitin family | E3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00630 all species → | Filamin | Filamin/ABP280 repeat | Domain | Interproscan |
| PF17170 all species → | DUF5128 | 6-bladed beta-propeller | Repeat | Interproscan |
| PF01436 all species → | NHL | NHL repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001258 all species → | Repeat | NHL repeat | Interproscan |
| IPR001298 all species → | Repeat | Filamin/ABP280 repeat | Interproscan |
| IPR011042 all species → | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR017868 all species → | Repeat | Filamin/ABP280 repeat-like | Interproscan |
| IPR014756 all species → | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR050952 all species → | Family | Tripartite Motif and NHL Repeat Containing E3 Ligases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24104 all species → | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000209 all species → | Biological Process | protein polyubiquitination | Interproscan |
| GO:0043161 all species → | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0061630 all species → | Molecular Function | ubiquitin protein ligase activity | Interproscan |
XP_074635190.1.
