Gene detail

Detailed information of XP_074637101.1 in Acropora palmata

Genomic Location: NC_133891.1:1633916...1635710
NR annotation: XP_015769265.1, PREDICTED: rab-like protein 3 [Acropora digitifera]
Species abbreviation APALM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D4V7	Rab-like protein 3 OS=Mus musculus OX=10090 GN=Rabl3 PE=1 SV=1
Q5ZKR4	Rab-like protein 3 OS=Gallus gallus OX=9031 GN=RABL3 PE=2 SV=1
A4IHM6	Rab-like protein 3 OS=Xenopus tropicalis OX=8364 GN=rabl3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009181 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477 all species →	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24073 all species →	DRAB5-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0012505 all species →	Cellular Component	endomembrane system	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07933	RABL3; Rab-like protein 3	-	GTP-binding proteins	ko04031	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.