Gene detail

Detailed information of XP_074639327.1 in Acropora palmata

Genomic Location: NC_133892.1:4106941...4115230
NR annotation: XP_044184240.1, THO complex subunit 6 homolog [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q5XJS5	THO complex subunit 6 homolog OS=Danio rerio OX=7955 GN=thoc6 PE=2 SV=1
Q5U4D9	THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1
Q6AY87	THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR042626	Family	THO complex subunit 6	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44411	THO COMPLEX SUBUNIT 6 HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000346	Cellular Component	transcription export complex	Interproscan
GO:0000347	Cellular Component	THO complex	Interproscan
GO:0006406	Biological Process	mRNA export from nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13175	THOC6; THO complex subunit 6	-	Spliceosome	ko03041	deepkoala