Genomic Location: NC_138156.1:16090034...16108863
NR annotation: XP_020601842.1, SMC5-SMC6 complex localization factor protein 1-like [Orbicella faveolata]
| CDS | |||||
| XP_081302006 | |||||
| Transcript |
| - |
| Protein |
| XP_081302006.1 |
| Uniprot term | Description |
|---|---|
| Q9BQI6 | SMC5-SMC6 complex localization factor protein 1 OS=Homo sapiens OX=9606 GN=SLF1 PE=1 SV=2 |
| Q6ZQF0 | DNA topoisomerase 2-binding protein 1 OS=Mus musculus OX=10090 GN=Topbp1 PE=1 SV=2 |
| A6QR20 | SMC5-SMC6 complex localization factor protein 1 OS=Bos taurus OX=9913 GN=SLF1 PE=2 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| PF00533 | BRCT | BRCA1 C Terminus (BRCT) domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036420 | Homologous_superfamily | BRCT domain superfamily | Interproscan |
| IPR036770 | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| IPR001357 | Domain | BRCT domain | Interproscan |
| IPR002110 | Repeat | Ankyrin repeat | Interproscan |
| IPR042479 | Family | SMC5-SMC6 complex localization factor protein 1 | Interproscan |
| IPR049936 | Domain | DNA topoisomerase 2-binding protein 1, eighth BRCT domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46677 | SMC5-SMC6 COMPLEX LOCALIZATION FACTOR PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006974 | Biological Process | DNA damage response | Interproscan |
| GO:0035861 | Cellular Component | site of double-strand break | Interproscan |
| GO:1990166 | Biological Process | protein localization to site of double-strand break | Interproscan |
| GO:2000781 | Biological Process | positive regulation of double-strand break repair | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K26126 | SLF1; SMC5-SMC6 complex localization factor protein 1 | - | DNA repair and recombination proteins | ko03400 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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