Genomic Location: NC_138156.1:22623352...22664168
NR annotation: XP_020606751.1, LOW QUALITY PROTEIN: thrombospondin-1-like [Orbicella faveolata]
| CDS | |||||
| XP_081302765 | |||||
| Transcript |
| - |
| Protein |
| XP_081302765.1 |
| Uniprot term | Description |
|---|---|
| Q03350 | Thrombospondin-2 OS=Mus musculus OX=10090 GN=Thbs2 PE=1 SV=2 |
| P49747 | Cartilage oligomeric matrix protein OS=Homo sapiens OX=9606 GN=COMP PE=1 SV=2 |
| Q9R0G6 | Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00084 | Sushi | Sushi repeat (SCR repeat) | Domain | Interproscan |
| PF13385 | Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily | Domain | Interproscan |
| PF00629 | MAM | MAM domain, meprin/A5/mu | Domain | Interproscan |
| PF02412 | TSP_3 | Thrombospondin type 3 repeat | Domain | Interproscan |
| PF05735 | TSP_C | Thrombospondin C-terminal region | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR028974 | Homologous_superfamily | TSP type-3 repeat | Interproscan |
| IPR000436 | Domain | Sushi/SCR/CCP domain | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR000998 | Domain | MAM domain | Interproscan |
| IPR035976 | Homologous_superfamily | Sushi/SCR/CCP superfamily | Interproscan |
| IPR017897 | Repeat | Thrombospondin, type 3 repeat | Interproscan |
| IPR003367 | Repeat | Thrombospondin, type 3-like repeat | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR008859 | Domain | Thrombospondin, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10199 | THROMBOSPONDIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0005576 | Cellular Component | extracellular region | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K04659 | THBS2S; thrombospondin 2/3/4/5 | - | Glycosaminoglycan binding proteins | ko00536 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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