Gene detail

Detailed information of XP_081304765.1 in Orbicella franksi

Genomic Location: NC_138157.1:9879338...9896809
NR annotation: XP_020609577.1, solute carrier family 12 member 7-like [Orbicella faveolata]
Species abbreviation OFRAN · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_081304765

ATGATCGTGACCACGTGTAGAAAAAATATTTTTCATTCTTTGTCACACATCAGTTGTTTGGTACTTTGTTCTTCACGTGGTGGTCTCGATTTTTTGCACTCGCTCTATGAGAAAGCGCCAGAGAGAAAAGCAAACAAACAAGGTAACTTTGTGGCTGGGAAAGCCGGGAATTTAGCATTATACGAGGATGAAATCCACAAACGACCGAGAATTTCAACACTGTTGGAGAGTTTATCAAGATACGAAGCAGTCCTGTCTCCTCAACAAGATGACGAAGAAGGAGAGGCGAAAACTGCCAAATCTTCTCAGGCAACCAAGATGGGTACACTTATGGGTGTATACCTTCCTACAATCCAGAACATATTTGGTGTCATCCTGTTTATTCGTTTGTCATGGATAGTAGGCATAGCAGGAACTCTACAAGCTTTCTTTATCGTCTTCATTTGTTGCTGTTGTACTATGTTGACTGCCATTTCAATGAGTGCCATCGCTACAAATGGAGTAGTTCCAGCTGGGGGAGCTTATTTCATGATTTCACGAGCCCTTGGACCTGAATTTGGTGGTGCTGTTGGGTTGCTCTTCTACCTTGGAACCACATTTGCTTCTTCTATGTACATCCTTGGAGCAATTGAAATACTCTTGACATACATGGCTCCGTCGATGTCACTCTTTGGAGATGTTAGGTCAGGAGGTGGTGCTCAGTCCCCAGTGATGTTAAATAACATGCGCGTGTATGGCTCTATTCTTTTGGTCTTCCTCATAGCAGTTGTATTTATTGGTGTCAAGTATGTCAACAAATGTGCCTCTCTCTTCCTGGTGTGTGTGTTGTTCTCTATTCTGGCCATTTATCTTGGATTTTTCTCTGCACAAGCAAGGGAAATGCCCAGGATTTGCTTGTTAGGTAACAAGTTGTTAGCCAGTAGCAGTTATCATGAATGTTCAAGGAATGATACCTTACTGAACTCAACGTATGGAGATGATGAGACATTCTGGAAGGAGAATCCCGTGTCTTCTGTGGTTGGAGTGCCAGGCATCACAACTGGTGTTTTTGCTGATAACTGGAAGAGTAAATATCTCAAGAAGGATGAAGTCTCTCCAGGTGTAATGGCTGGTGAATTTCAAGGAGAAGTGAGATCAGACATAACCACATCTTTCTTCATTCTATTGGCAATTTTCTTTCCTTCTGTGACTGGAATAATGGCAGGGTCTAACAGGTCTGGTGACCTGCGGGATGCTCAGCAGTCAATTCCTAAGGGTACAATAGCTGCAATTACCACAACATCTGTTGTCTATCTAACTTGTGTGCTGCTGTTTGGAGCAACTGTACATGGAGAACTACTGCGGGACAAATTTGGTCGCAGTATCAATAGTGTTATGGTTGTAGCCGAGATTGCTTGGCCTCCTACCAAATGGGTGATTCTTATTGGTTCATTTCTATCAACTGTTGGTGCAGGCATGCAGAGTTTAACTGGTGCACCCCGTTTGCTGCAAGCCATTGCTAAAGACAATCTGATTCCGTTTCTGAATATCTTTGCTTGTGGTTCCAAGTCTGGAGAGCCAACTCGTGCCTTGATGCTCACAGCTTGTATTTCAGAAATTGGAATTCTGATTGCCAACTTAGACTCAGTTGCGCCAATTATCACCATGTTCTTTTTGATGTGTTATGGGTTTGTCAACCTGGCCTGTGTGTTGCAGTCGCTGCTCAGGACGCCAAACTGGAGACCACGATTCAAGTATTACCACTGGTTCACGTCGTTCGTGGGTATGTGCCTGTGCTTGGCTCTAATGTTCATCTCGAGCTGGTATTACGCGCTAGTCGCTATGATCTTAGCAGCTGCCATTTACAAATACATTGAATTCCAAGGAGCAAAGATTGAGTGGGGAGATGGTTTCAGGGGACTGGCACTGAGCGCAGCCAGATACAGCCTGTTGAGAATGGAGGAAGGTCCACCCCATACTAAAAATTGGAGACCTCAGATTCTTGTTCTTTGTCCGCTTAAAAAGAATTCTGAACCTGAATCCAGTCGCCTGTTGAGTCTGGCGAGTCAACTTAAACATGGGCGTGGTCTTACTATAGTGGGGTCCATTTTAGAAGGAGATTTTAAGGAAAGAGCAGACGATGTGGCTTTAGCAAAGGAGGTTTTACACGATTGTATGAAAGAGGAAAAAGTTAAAGGGTTCATGAAAGTAATCGTGGCTTCCACAGTGACAGAAGGAATATCATTCTTAGCGCAGAGTTCTGGCCTTGGAGGCCTGGAGCCCAATACACTGATGATCACTTGGCCTGAGAACTGGCGGGAAAGATCACAGTGGAAGAGTTTTGTTCATACCATCCGCTGCGTGTCTAAAGGTCAAGAGGCGCTACTTGTAGCTCGCAAGATAGACGCGTTTCCTAGCAACGCAGAACGCTTGGAAGGCAATGTGGACGTTTGGTGGATAGTACATGACGGTGGTTTGATGATCCTGCTTATCTTCCTTCTTAAACAGCATAAAGTTTGGAGGAAATGTAATCTCAGAATTTTTACAGTTGCACAACTCGAAGACAACAGCATCCAAATGAAGAAGGACCTGGAGTCCTTCATGTACCAGCTCAGAATCAAGGCTCAAGTTGAAGTCATCGAAATGATGGACCAAGATATCTCGGAATACACTTATGAGCGTACACTATTGATGGAACAGCGGCATCAATTGTTACGTGAAATGCATCTCTCGAGAAAAGAGAGCAAGCGAGAAATACAAGACGTGCTCGAGCATTCTCACAGCAGACGGTCACTCTCCAGACGAAAATCGAATTCCGAACGCAAAACTGGAAATCAAACAGAGGACACGAGTAACCCTGACAACGAATCGAACCTTGCTGAAAGGCTTCCGAGTACATCCGATAAGTATACGAAAAGTGCCGAGAAAACTCCGACTGTGAGTGTCGATGGTACCACGGAGTTCGGCGATGATAAGAGTAAAGCGAACACTGGATACAGTACAACACCAGACCAAGAGTCTAGCGTCAACAAGGATGAACTTGTAGATAAAAACTGGGACATTGATCAGGGAAAGGATGGCGGCAATGCTTCGCTCAGGGGACAGGGCCAAAGTACGGCTGATGGAAAAGAGAGCTTGAGAGGAACACTGAAGGAGAAGAATTTAAGAAGAATGAACACAGCAGTGAAGCTAAACCAGCTGGTGAAGGATAGGTCAACAGGAACTCAACTTCTGGTTATCAACTTACCTGGAGCGCCAACAGACGACAACGACTGGTTGCACTATATGGAGTTTCTAGACGAGCTCACAGAGGGACTGGACCGAGTGCTCATGGTGCGCGGTGGAGGACGGGAAGTCATTACCATTTACTCGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UHW9	Solute carrier family 12 member 6 OS=Homo sapiens OX=9606 GN=SLC12A6 PE=1 SV=2
Q924N4	Solute carrier family 12 member 6 OS=Mus musculus OX=10090 GN=Slc12a6 PE=1 SV=2
Q91V14	Solute carrier family 12 member 5 OS=Mus musculus OX=10090 GN=Slc12a5 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005308 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00324 all species →	AA_permease	Amino acid permease	Domain	Interproscan
PF03522 all species →	SLC12	Solute carrier family 12	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004841 all species →	Domain	Amino acid permease/ SLC12A domain	Interproscan
IPR004842 all species →	Family	SLC12A transporter family	Interproscan
IPR000076 all species →	Family	K/Cl co-transporter	Interproscan
IPR018491 all species →	Domain	SLC12A transporter, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11827 all species →	SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0006884 all species →	Biological Process	cell volume homeostasis	Interproscan
GO:0007268 all species →	Biological Process	chemical synaptic transmission	Interproscan
GO:0015377 all species →	Molecular Function	chloride:monoatomic cation symporter activity	Interproscan
GO:0015379 all species →	Molecular Function	potassium:chloride symporter activity	Interproscan
GO:0055064 all species →	Biological Process	chloride ion homeostasis	Interproscan
GO:0055075 all species →	Biological Process	potassium ion homeostasis	Interproscan
GO:1902476 all species →	Biological Process	chloride transmembrane transport	Interproscan
GO:1990573 all species →	Biological Process	potassium ion import across plasma membrane	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14427	SLC12A4_6, KCC1_3; solute carrier family 12 (potassium/chloride transporter), member 4/6	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.