Genomic Location: NC_138157.1:18898290...18931788
NR annotation: XP_020631198.1, chromodomain-helicase-DNA-binding protein 8-like isoform X2 [Orbicella faveolata]
| CDS | |||||
| XP_081306131 | |||||
| Transcript |
| - |
| Protein |
| XP_081306131.1 |
| Uniprot term | Description |
|---|---|
| Q06A37 | Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus OX=9031 GN=CHD7 PE=2 SV=1 |
| Q9P2D1 | Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens OX=9606 GN=CHD7 PE=1 SV=3 |
| A2AJK6 | Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus OX=10090 GN=Chd7 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00385 | Chromo | Chromo (CHRromatin Organisation MOdifier) domain | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF00176 | SNF2-rel_dom | SNF2-related domain | Domain | Interproscan |
| PF07533 | BRK | BRK domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR037259 | Homologous_superfamily | BRK domain superfamily | Interproscan |
| IPR006576 | Domain | BRK domain | Interproscan |
| IPR000953 | Domain | Chromo/chromo shadow domain | Interproscan |
| IPR049730 | Domain | SNF2/RAD5-like, C-terminal helicase domain | Interproscan |
| IPR038718 | Homologous_superfamily | SNF2-like, N-terminal domain superfamily | Interproscan |
| IPR023780 | Domain | Chromo domain | Interproscan |
| IPR016197 | Homologous_superfamily | Chromo-like domain superfamily | Interproscan |
| IPR000330 | Domain | SNF2, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45623 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0140658 | Molecular Function | ATP-dependent chromatin remodeler activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14437 | CHD7; chromodomain-helicase-DNA-binding protein 7 | EC:5.6.2.- | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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