Gene detail

Detailed information of XP_081308609.1 in Orbicella franksi

Genomic Location: NC_138158.1:3818105...3851560
NR annotation: XP_020611954.1, uncharacterized protein LOC110050375 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_081308609

ATGTTAAGCTTACTTGATCAAAGCAATTTGCAAAATTTGCAAATTGTCTTGATCAAGAAGGTAAGAAGAAGTTTACATGAACTTGATTCCCAACGACAATCGTTGCCGATTGACTCACAACGTTCCTCCTCCAATCTTCGGAAATCATCGGATTCTGAACGACAGCCCGACACGATGAAATCTATCAACGATCACCCGCCGACAAGTTTGCGGAAGGAATTAGAACGTCCTAAACAACACTCACCAAATCTTCAGATGGAACCGGAAGAGACAGAACAACAGTCAGAAACAATAAACTTGTCCAATGATGAAACCACTAAGTTGGAACCATTACACTTTTCACAAGATGAAGAAACACCTAAGAAGGGACAAATTCAAGAACCATATTTACCGGAATCTCAGACTAACTTTCACCAACAAAAGATAGAGAAAATCCCTTCCTTGAGTCAGACAAAGAACTCCCCGACTGATAGGGATTTAACTATTCATGAAATCGATCTTGATGAATCGCAAGAAAACTCTAACTATCGTTCTCTTGCGGAGAATCAGAGTTTAGACTTTAAGGATAAGTCAGGTCGAAAGACTAAATACGATGGTAACTCTAAAGGATCTATGTCAGAACTGGAACCGCTAAGTATTCATGATCAAAATAACATCACATTGAATGAGTCTCGGCAAGCAAGACCCAACCACGAACAGGACTCGAGCAAAGTGGCTTTGAATCAACAAAGTAAAATTACCCATAATAAACAGCATTCCGATCCACTTCCGAAGACATCTTCGGAGAAAGCAAGATCCGACTCCGAACAGGACTCAAGCAAAGTGGTTTCAAATCAGCAAGGTAAACCGCCGCCGAAAATTACCGATAATAAACAGCATTCCGATCCACTTCCGAAGACGTCTTCGGAGAAATCAAGATCCGACTCCGAACAGGACTCAAGCAAAGTGGCTTCAAATCACCAAGGTAAAACGACTCCACAAATTACCGATAATGAGCAGGACTTCGATCCACGCCCGAAGACATCTTCGGAAAAACGAAAAAGTCTTCTTATCTTTGGCGACGATCGTTCCGGGACGACATTTATAACTAAAATGTTTGCAGCAGATCCGCAAATGTTCACAGTGTATGAACCATTGTGGGTTACAAAGAAATGGTTCTCCCAGCTTCAAACAAGAGATCTTAAGAAAACTCAATCTACAAGAGACGTAGTGAATGCCTTGCTATCTTGTCAATTCACCCGTTCAATGGCAGGGAAAAAATTTCTTGCTTCCACTGCAAGCTCTTGGGTTGGTAACGGGGTCTTCGAGAAAAACGTGTTTAGAACATACCCCTTTGCAAAAAAAACAACATCAGGACGAGCCACTTGGCCTAATCTTTACCAGAATCCAAAATTCGCAGAAGAGGTTTGTCTTAACAAATTTAACCACAGTGTTGTCAAGGTGGGACAGGTTCGAGTTCCTCTCGAAAGCATCTCAGTTTTTATCCCGAATGTGTTTGTTGCGAATCCAGACACGGACATCCGAATTATTCAAATCGTGCGCGATCCTAGAGGAAGCATAAACTCGCGAATAAAAGCTGGTTGGATTTCTGATTTCACCTACACGGGATTTCCTGCACTAGTGGGTAGGATGTGCGCGAAAATTGAAGCGAACATAAGGTTTGGTAGACAGTTAGAGAATGCGGCGATGAAAGAACGGTATATGGAGATCAACTACGAGGAAATTACTAGTATGCCTATAACAACAGCTAAGAAAATATACAAATTTGCTGGCTTCGAAATGCCTGATAGTTTAATTGACTGGATTGTGCAAAGCACGAATCCAGATGAAAGGCAATTGCAACAAGCTTTGAATAACCCATTTTCTCACGTGAGAGATGCTAGAAAGAATTACCTCAAGTGGCGCAGTGAATCTCCGATAAAGCGTGTTCGAGTCATAGAACAGCGATGTACGGCTCTGTTAGACTTACTTGGACTTGATGCAGTTGCCGATGAAATGGAAACGTTATGTTCATAG

Transcript

Protein

Uniprot

Uniprot term	Description
O88199	Carbohydrate sulfotransferase 3 OS=Mus musculus OX=10090 GN=Chst3 PE=1 SV=1
O93403	Carbohydrate sulfotransferase 3 OS=Tetronarce californica OX=7787 GN=CHST3 PE=1 SV=1
Q9QZL2	Carbohydrate sulfotransferase 3 OS=Rattus norvegicus OX=10116 GN=Chst3 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13469	Sulfotransfer_3	Sulfotransferase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051135	Family	Gal/GlcNAc/GalNAc Sulfotransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10704	CARBOHYDRATE SULFOTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001517	Molecular Function	N-acetylglucosamine 6-O-sulfotransferase activity	Interproscan
GO:0006044	Biological Process	N-acetylglucosamine metabolic process	Interproscan
GO:0006790	Biological Process	sulfur compound metabolic process	Interproscan