Gene detail

Detailed information of XP_081308710.1 in Orbicella franksi

Genomic Location: NC_138158.1:20006771...20044478
NR annotation: XP_020629147.1, nuclear factor 1 C-type-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P13623	Nuclear factor 1 X-type OS=Mesocricetus auratus OX=10036 GN=NFIX PE=2 SV=1
P70257	Nuclear factor 1 X-type OS=Mus musculus OX=10090 GN=Nfix PE=1 SV=2
Q14938	Nuclear factor 1 X-type OS=Homo sapiens OX=9606 GN=NFIX PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03165	MH1	MH1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020604	Domain	CTF transcription factor/nuclear factor 1, DNA-binding domain	Interproscan
IPR000647	Family	CTF transcription factor/nuclear factor 1	Interproscan
IPR003619	Domain	MAD homology 1, Dwarfin-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11492	NUCLEAR FACTOR I	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan