Detailed information of XP_081310020.1 in Orbicella franksi

Genomic Location: NC_138159.1:8337487...8416022
NR annotation: XP_020607215.1, nesprin-1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9QXZ0Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2
O94854Microtubule-actin cross-linking factor 1, isoforms 6/7 OS=Homo sapiens OX=9606 GN=MACF1 PE=1 SV=5
Q9UPN3Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5 OS=Homo sapiens OX=9606 GN=MACF1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00435SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002017RepeatSpectrin repeatInterproscan
IPR052403FamilyLINC complex-associated proteinInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47535MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM GInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005640Cellular Componentnuclear outer membraneInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007097Biological Processnuclear migrationInterproscan
GO:0034993Cellular Componentmeiotic nuclear membrane microtubule tethering complexInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19326SYNE1; nesprin-1-Chromosome and associated proteinsko03036deepkoala

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