Detailed information of XP_081311087.1 in Orbicella franksi

Genomic Location: NC_138146.1:28674561...28685723
NR annotation: XP_027045710.1, cartilage intermediate layer protein 1-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
B3EWZ3Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF10591SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding regionDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR002350DomainKazal domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR039675FamilyCartilage intermediate layer protein 1/2Interproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR019577DomainSPARC/Testican, calcium-binding domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR008969Homologous_superfamilyCarboxypeptidase-like, regulatory domain superfamilyInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15031CARTILAGE INTERMEDIATE LAYER PROTEIN CLIPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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