Gene detail

Detailed information of XP_081314366.1 in Orbicella franksi

Genomic Location: NC_138146.1:38643928...38670774
NR annotation: XP_020625422.1, multiple epidermal growth factor-like domains protein 11 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_081314366

ATGAGCGTTTCTTTGCTATGGGTGGCTTCTACAATAAGTTTAATTCTTCTCTGGTATGTAAATGAAAGTGGAGGATCTTTGTCAGGAAATGGAGCAAACGTTTGTTCAAGATCGCAAAGTTATGTGCAGACATACAAACAATCTTATCAAATGAGTTGGAAGAAAAAGTCAAAAACTAAATGTGGATTGTGGGGCTGGGGACGATGCACAACATACAGAACAGTGTATGGCATGGCTTATAGAACAGCAACACGTCAAGCATACAAACATGTTTATTTCTGTTGTCCTGGTTGGAAACAGCGAGGAAATGGTTGTCCAACTGCTATCTGCAAGAGTGCTTGTATCAATGGGACATGTACAAAACCAGATACTTGTTCATGTAATGCAGGCTTCTACGGAGCAGTATGTGACAGAGTATGTCCTACTCATAAATGGGGTCCTCATTGCCGACATGACTGCACATGTCAAAATGGAGCTAAATGCCATTCACGCACTGGCACATGCACCTGCACTCCCGGATGGAAGGGTCAGTCATGTGATCAGCCCTGTGACCAAGGTTACTATGGCGACAAATGTCAATACCAGTGTGCTTGTCAGAATGGTGCAACTTGTGAACCTGTTACAGGAAATTGCTCATGTGCGCCAGGTTATAAAGGAAAAAGATGTGAACTTGAATGTGACCAAGGGTGGTATGGCCAGAGTTGTGGAAGCAAGTGTATTTGCCTTAATGGTGGCAGTTGTCATCATGTTACTGGAACATGCAACTGTACTGCAGGATGGCAGGGTGATTTGTGTGGTGTAAAATGTCCACAAGGAACGTATGGATATAAATGTTCCCTGACATGCATCAACTGTTTGAATGGTGCCGTCTGTAATCATGTGAATGGAAGCTGTACTTGTGCTCCTGGATATCAAGGACGTAGATGTGGAGATACCTGTCCTACTGGAACCTATGGGAATTTCTGTGCTGAAGAATGCCGCTGTAAAAATGGCACATGTTCTCCTGTGGATGGTACATGTAATTGCACTGTTGGCTACACAGGTGCATACTGTGATCAGCCATGCGCAGCAGGCTCAGCTGGGCTGAACTGTACTAAGCATTGTAATTGTACTGAGCACGGAACCTGTAATCAGTTCACTGGAAAATGCCAATGTCAGCCTGGCTTTAAGGGTAACCACTGTGAACTGGAGTGTAGTGAGGGTTTCTTTGGACCTCAGTGTAATGGAAAATGTCAGTGTCTTAACAATGCAACTTGTAACAAGGAAGATGGTACATGTGACTGTCAGCCAGGATGGATAGGAGTTCACTGTGACAACCCCTGCCCTGCTGGGTACTATGGCAAGAACTGTCAGTCAAAATGCAGGTGTCAGAATGGGGGGTCTTGTGACTCTGTTGATGGCAAATGTACATGTGTGAACGAGTGGCAAGGAAAAATCTGTGATATCTTGTGTGAAAGCTGGACGTATGGTGTGAACTGCAGAAATTCATGCCTTTGTAATCAAACTCGGACAGAACGATGCCATGCAATAACTGGCAAGTGTTTCTGTAAGAATGGATTTACAGGCTCACAATGTAATCAGCAGATAAAATGCAATGTTGGCTATTATGGCAATAATTGTAAAAAGAGGTGCAACTGTAACAATGCTCCATGTGATGTTGTTACTGGTGTCTGTGATTGCCCAGCTGGTGTAATGCTTCCATCCTGTACTAACAAGTGTCCATCAGGTAATTATGGTTACAAGTGCCTGGAGGATTGTCAGTGTCAGAATGGTGCTTTGTGTGATCCAGTGAATGGTGCTTGTTCCTGCACAGCAGGCTGGCAAAGCACATTTTGCGAACAAGGTTGTCCCGATGGCTGGTATGGTCAGGGATGTAACAGTAGCTGTGATTGTTTACATGGCTCTACATGTCATCATGTCACTGGAAAGTGCACCTGCAGTGCGGGATGGCAGGGACTCACTTGCAACAGTTCGTGTGATAGTGGATTCTATGGATATGGCTGTCAATCTATTTGTCAGTGTTATAAAAGTAACACCATATCATGTGACCCTGTTGATGGGCGGTGCTACTGTGACCCGGGATGGACTGGGAAAGAGTGCACTTTGTTCTGTCCAAGAGGAAAATTTGGTCCAAACTGTTCTAAAGATTGCAAGTGCAGAGAGCAGTCAACAGAGAACTGTGATCACGTGACTGGGGCATGCACCTGTCTGGAGGGGTGGATTGGGGACAAGTGTGACAGGACTTGTTCTGTTGGTTTCTATGGTTACAAGTGCAAGAAGGAGTGTGAATGTAAATTTCCTAACATGGATAAAGAATGTGATTACAGAAATGGAGAGTGTAACTGTGAGCCCGGATTCACCAGTGAATACTGTAATCAAACCTGTCCGGAGGGTACCCATGGATTTAAGTGCGAGGAGAAATGTCTTTGCCAGAATAATTCAACCTGTGATAATGCATTTGGTTATTGTGATTGTTTACCTGGATTTCAAGGAAAGTTTTGTGAAGAAGTTGTTACCCAACTCAGCACCGTTGTTCCCAGTGCCGATAATAAAAACTCGTCCAAATCAGGCCGTTCGGCAGGAACTGGTTCCAGTTCAGTTGTGACGCCAGTGGTGGTTGCTGTGGCTGTCACCATGGTAGCCATTATCCTTATCATTGTGTTTGTTTACTTGAGAAAGAAGCATATCTTGATATCCAGGACAGGGAAGGGCTTGTCAGTGAGGAGACTTGTTAAATCCCCAAAGAGTCGACAAAAAGAATTTGACGATGTAAGTGAGGCCGACGGTGACGGTGATCACGTGACAGAAGACGTGTCGGTAAACCCCATATATGGCCATTTATCAGACCCAGATTCCATTCCTCTGGATTTGATCCAGTCCCCTGGAGACAAACCCACGTCAATGACAATGAAATCTATCAATAATCCAAATTACGAAAGCACGTTAACGCTTTGTGCTCAACGTGAAAAAGTAGCTAGTAATCCAATATACCAGACAGCAAACGATATTGAACAAGACAATCCATTGTACGAGACCGGGGCTGGAGAAGCCGAAAGAGGGATTTCTAATGTCGATATAAACCCACTTTATGAACCAGGCCCTGCCGGAAGTGTTAGCGGGGGATCTGGTAACTTGGCTGATTTGAATCCTCTGTACCAGTCCGCTGTTTCCTATCGCAGTCAGAATGATTTCAATCCCTTGTACGAGGGTGCGTCTGACGTGAGCCCGCTGTACGAATCAGCGGAGTGGCCGAGTCGTGACGCAAAAAGTGGTAAAGTGCGACGGAGGGTTGATTCGCGATCGAAAAAAGAAGACAAACAATGCATGGAAGATGAATTACCCATCATCGATGGAGAGGCCTCTTACTGGGATACAAATGATGACGGTGGGCTTGGCGTGAGTAACAGGGGTACTGACATAACATTCAATGAACTGTACGGAAGCGTAGGACAGACTGACTCCTCCCTCCAGGAAAATGACCCCGAAGCCCCCCCTGTACCTCCAAGAGTGCATGTCAAGCGATCCTGA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00053	Laminin_EGF	Laminin EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR002049	Domain	Laminin-type EGF domain	Interproscan
IPR011489	Domain	EMI domain	Interproscan
IPR042635	Family	MEGF10/SREC1/2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24043	SCAVENGER RECEPTOR CLASS F	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005044	Molecular Function	scavenger receptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24068	MEGF10_11; multiple epidermal growth factor-like domains protein 10/11	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala