Gene detail

Detailed information of XP_081315028.1 in Orbicella franksi

Genomic Location: NC_138147.1:2350007...2377898
NR annotation: XP_020620135.1, FYVE and coiled-coil domain-containing protein 1-like, partial [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9TZD0	Lateral signaling target protein 2 OS=Caenorhabditis elegans OX=6239 GN=lst-2 PE=2 SV=2
A8XJZ8	Lateral signaling target protein 2 OS=Caenorhabditis briggsae OX=6238 GN=lst-2 PE=3 SV=1
Q96T51	RUN and FYVE domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RUFY1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF01363	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR017455	Domain	Zinc finger, FYVE-related	Interproscan
IPR000306	Domain	FYVE zinc finger	Interproscan
IPR050776	Family	Ankyrin Repeat and Cyclin-Dependent Kinase Inhibitor	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24201	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan