Gene detail

Detailed information of XP_081325586.1 in Orbicella franksi

Genomic Location: NC_138150.1:30051956...30064052
NR annotation: XP_020626506.1, src kinase-associated phosphoprotein 1-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_081325586

ATGGATTCAGTTAACAAGGATGTTAAGGAGGCCGTGTGTGAGGCTGAAAAGTTTTTCTCTGTTACATTGGCCCAAGAAAATCTATCTCCAGGAGCAGAGAAAGAGCGCAGCCTGCTAGCAGATAAGTTCAGGAAGTTAAAAATTCAACTTGGTTGCAAAAATGATCTCCCAGGTGGAGGCAAAGCACCGCTGCGGCCGCCAAAGGGTGGAATAGCTATACCTGGACTTGAAGCTTCTGAAGCCCAGGATGGTGAAGAATTGTATGATGATGTGGCAGGTGTGATCCCTCAGGACGACTATTGTGGGATGGACCAAGGTGCTGGAGGAAATCAGAATCAGCGTCAGGCAACAGATATGTCTGGTGAAAATTACGAGGTGATGTCAGCAGAGCAGACAGATGGGACGTCACAAGGTGAAGCTGCAGCTGGTGAGGACTATATGGCAATGGAGGATGAAGTTCAAGAGGATTATGAAGAACCTCAACAGGAAAACACTGCGGATGAGGATTATGAAATAACAGAAAGCAATAAACAACCTCCTCCATCACAGGATGAGGAATATGAGCTGCCAGATGCTGATTCAGACTATGAAGAGGCAGACAAGTCTACTCCATCAAAAACTGCTCCTGTGGAAACTGATAGTATGTATGAAGGGGTTGAGCCAGGCATGGGAGAAGGCTCCGTTGATGGTCCTCATATGACAGCAAAGGAAAGGTCAGGCTCGGCCAACTTGGATCATTACATGAAGAAAATTAAACCTGAGAATATTGAGGGCATCATTTGTGAAGGTTTCTTGAAGAAACTCCGCAAGGAAGGCAAAATATATGTGGGAAGTAAGTGGCAGAAACGTTACTGCGTGGTGCGGAACCATGTACTCTACTACTTCAAGGATAAGAAAGCAAAAGAGCAAGCAGGCCAAATTCTGCTGCCGGGTTACAAAGCACAAGTGGCTAACAGGAAAGGTCGCGAGTTCAGCCTGACACATTCACAACTTGAAATTAGGGCATATCAGTTCGAGGGCACCTCTAAAGAAGAAACAGAAAAGTGGATAAAAGCCATAAATGCCGCTTGCGACGCTCCCTTGTCAGAGGATCAAACTGCTTTGTTAGCTGAACTCCGCAACAACAAACAGCCATCAGGTGACGAGGACAGCTTGCATTACGATGACACAGGACAAGCCAAGAACGAGGTAGCGGACGAGTCCAATGGTGACGATGTCTATGATGACACTAATGAAGATTTCTATGAAGTAGTCGGCATTGCTACCCAGTCCGCTGCCTCTAACCAGCAGTCGCAACCACCGAGGCAGGATGTTGATTATGAGATTTCTGCCGCTGCAGTCTCCTCGACGCCAGCTTCTGCTCCTGCTGAGCCTTCACCAGTTGAACCAATACAAGAAGACTACGAGCTTCCGGAACAAACCAGTCCCGCGCCACCTCCCCCACGACCTACTAAATCACAACCCCAATCACCAAGGGAAAACATCCCCCCTGACTTACCACCTCCACGGCCTTCCAAAGCTCAGCCAGCGTCCCCGGCCGCACCGCAACAAGATGAATTGTACGAAATTGCCGATAGTCCTGAGGTTACCTCCTCAGAATTACCACAACCACCAGCGCCGCTGAGACAAGAGGAAAATTACGAAATATCGGGCGAATCGCCACCACCAGCACCAGCCCCCGTGCGACCTCCCAGAATACCTCAACCACCGACCCCACAGCCGTCACCAGATGTTTCACAAAAAGAGACTCATGAGAAAATTCCGGAGCGACCTGCTAGGCCTGGTGCCAAGCCACAACTTCCGCCTCCACCTCAACGAAAAGACGAACCACCGCAGAGTCCCTCAGAAAATCAAACTAACGAAATAAATTACGCCAACATTTACCAAGCCTTGTGGAATTGTGACGCTGGTGACAAGGATGAACTGGGATTCCGACGCGGTGATCTCATTTACATTTACGAAAAGCCGCATCCTGATTGGTGGATCGGTTCCTTGTTCAAACCTCAAGGGTACAGTGTGGGCCTGGTACCGAAACAGTATGTGATGGAGGCTTATGAATTGACTGCATCTTAA

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q32LP7	Src kinase-associated phosphoprotein 2 OS=Bos taurus OX=9913 GN=SKAP2 PE=2 SV=1
Q920G0	Src kinase-associated phosphoprotein 2 OS=Rattus norvegicus OX=10116 GN=Skap2 PE=1 SV=1
Q5FVW6	Src kinase-associated phosphoprotein 2 OS=Xenopus tropicalis OX=8364 GN=skap2 PE=2 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14604	SH3_9	Variant SH3 domain	Domain	Interproscan
PF00169	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR037781	Family	SKAP family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15129	SRC-ASSOCIATED ADAPTOR PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23471	SKAP2; src kinase-associated phosphoprotein 2	-	Yersinia infection	ko05135	deepkoala