Gene detail

Detailed information of XP_081325944.1 in Orbicella franksi

Genomic Location: NC_138150.1:21298757...21342100
NR annotation: XP_020611938.1, uncharacterized protein LOC110050360 isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_081325944

ATGATTCATTATCTGATCAACCAGGGAGAAGTCTGGATCTGTATGGAGCTAATGAAAGCATCATTAGGTGAATTGTACGATAGAGTATATGCCACACCCGGCAGAAGGATGCCTGAGGATCTCCTACGAGAAATAGCCATTGCTTTTTTTCATGCCTCAAACCATTTGGTTAGGTGCAAACTGAGAACTGTAGGAGAATCTGTAATGCCGTCCAATATTTTTGTAGATGACAAAGGAAATTTCAAGCTGCGTGTGGGTTTTCAATTTAAGCCTGGACTTTTCCATTCTGCGGAGCTGCGAGAAAGTGGCTTACACATATGGCTCCTAGGGATGGCCATGATACGACTCGCAACATGGGAGATCTCTGATTCCTATCATCATTTACCTAGTCTCCTTGCTGATGGGTCATACTCGGATGAATTAAGAGATTTTGTTGTTCAATGCTTAAAGACGCGTTATCTTGAAGGACCTAACCTTGCCTTACTTTTGGAACATGCGTTCATAAAAGGAAGCAACGCACAGAACAATTTTGACACTAAACGTTGGGTAACAACTATTCTCCAAGAACTGGAACAGCCCATAGTACCTCCAGAGATTACTGTACGAGGACGTTTGGCTTTGGAAGCCTACAAAAGGGCCCTTGCTGAAGGAAAGACTTGTGACAAAAGAGTGCCAGTCATGTTGATTGGCCAGGACAGATCAGGAAAGACCAGCTTAAAGAAGTCACTCAGGGGAGAGCCTTTCAACCCAGATGAAGAGAGCACTGTAGGGATAGATGTTGATCCTTCTCATTTCAAAGTGTCAACTGAGATTTGGAAGATAGGGGAGAAGGATCAAGAAAGAAATTCGGAGACGTCTATTTCCTATGAGTATCATGCAGCACGAGCAACTGTTGAAAAGTTGAAGGAGGAACAAATGGCTCCCAGTCCTAAGGAGAGGGTTCCAGAGACCAAACAGTCTGGAAACATCCCTATGGTGGACAAAGTCCCAGCAAGTCCAACCGGTTCTACAGTAAGACAAAACGACAGATCTGATGAGATGTCAAACGATCCAGAATCTGCTCAGGCATCCAGATATCCTGTACAAGATGACAGCATAATGCCAGATGTCACAAAAGATACAGGTAACCAAGGCGACAGATCTGATGAGACTTCCAACGATCCAGAGTCTGTTCAGGCCTTCAGATATCCTGAACAAGATGACAGCATACCAAAAGATATAGAAACCGAGATTACAAAGAGACTGGAAAATGACAGTAAAGTGGAAGACGAAGAAGCTGTACATTCCGTTTTGTGGGATTTTGCTGGACAATCAGTTTACTATACGACACACCCACTTTTTCTCACTCCAAGAGCGATCTATCTTCTGGTGAATGACCTCAGCCAAAATCCCAGTGAAAAGGCGAAACCTGTTGTGAAGCAAGGAATGTACAAGGAATTACTAGACAGTTTTGGTTTGAAAACTAACTTTGATTATTTGGATTTTTGGATGTCTTCGATTGCTTCTCTGGCCAGTCAAGAAGAAAGTGATCAAGAAAATGTTGAATCTGAGGTGTTACCAGAGAGACTTCCTGCAGTTTTGTTGGTGTGTACGCATGCTGATACACCTTACAAAAGCCAGTCTGATCCAATTACACTAGCCAGGGAGTTATTTGGGTCTCTGCAGACCAAACCATACAAAATCCACCTGCATGATCTCTTCGTTGTGGATAACACCATGTCGGGTCATGGTCACGAGTGTCCAGAAGTCGTGCGCCTGCGTCAAGAAGTACTTGTCGTTTCTAAAGCACTGCCTCAAATGACGGAAACCATTCCAATCAAGTGGCTGAAATATGAGAAGGAACTCCAGGTCATGAAAGAAAGTGGTAAGAAATGGATAGACCGAGACGCAGCGACAACAATCGCATCTGAAGCTTGCAACATTTTTAATGATCAAGAATTCCAGACATTACTGAACTTTTTGCATGACAAAAGAATTGTGATTCACTTCAATGACACTCCAGAGCTGGATAAATTGGTAGTCTTGGACCCACAATGGTTGATTGACGTGTTCAAAATGGTGATAACCGTCAGGCCTTATAACCCTAAAGAGAAGAAATTTGTAACACTTTGGGATAAGCTTGAGAATGATGGAATCCTGGAGGAAAAACTTTTAGAGCGTGTTTGGGCTCCTTTATTTGGCGACAGAGAAACCTTTGAGAGTCTTATCGCGATCATGGAGAAATTTAGCTTGGTTTGTTCTTGGCCTTCATCTGATGCTTCATGTAGCAAGCAGTATCTGGTACCGTCCATGTTGATGTCACATCCACCCGAGGGCATAATGAGCTTGGTTGCAGCAGCTCGTATTCCCCAACTTTTCCTTAAATTTGAATCTGGTCAAGTTCCGCCTGGCTTGTTTCCCCGACTTGTGCTGCAGTTCTTTCAGTGGGATCAAGAAGAACAAGGGAAGCCTCAACTGTACCACAATTTCGCCAGATTTTACACCTCTCAAGAGGAAGACTGCTCCGTAATCCTTCTGTGCCATTCATCTTCCATTGAAGTTGTTGTTCACCAAGGGACGAGTCAAGACTTGGCAGACAGTCTACAATCAAATCTCTCTTGTTCTGCTGATGTCAGCTATGACACATGTGAGGTGACCTGTGCTCATGCAGTGCGTAGGCAGCTGGAATTGATGCTTGAGTCCATTCGAAATGAGTTCTGTTGGCTGAAGAATATGAAATATGAAGTCAGCTTCATCTGCCCAGTCTGTTGTCAAGGAGGTGCGGTTATCTTCTGTCGTAAGCATGCTACGCAAGGCTGCAAGCAAGAGGAATGCCTTCACTTCTGGTCTGAGACTCAGTTGTGTGATGTCGAGAAGGTCGTCTGTTGCACCAAATCAGCTGTTGCACAGAGTAACAGAGTTGACATCAAGCAGTTTACACCATGGTTTGCCCCTCCACGAAATCAGCTGACAGTTGTTGATAAGCATAATGGAGGAGATTTGGCCAATATGCAAGGAAGTAAAGCAATTGCCCTTCCTTGTGAGGTTCGAGAATCCCTTTTGTGCCAGACGTCTGATTCCAGAGAAGTTGTTCGTCAACTGCAAGAGACTCTACAGCCGGACCAAGCCTCACTGAAAGAGCCAGAACCTGAAACCAAGCAATTGATACGTTGTCTAGCAAGGGCAGCTAAAGATTCAGACAGGCTTGATGTGCTCGAACATTTGAGAGAGATTACACCAGCTGGAACGACTGGTCCTCGGATGTCTGAGCACCTTGATGTCCAGAATATCCCTGGTTCTAAGAGAAGAGACCTCACAGTTGATTTGTGTGGTGGAGAAGAGTGGAAATTGGTTGCTGAGGAACTGGGCCTCACTCCAAAAGAGATACGTTTCCTTGACAAACGTACTCTGAACCCTCTTGACGCTGCCCTGACTTTCGTTGCTAAGCAGCGTCACATAACTGTGGGAGATTTGTATGACCTGTTAAGTGATTGTGGCTTTCCCCTGATAGCTGACCTTACGTTATAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q54WS5	Probable serine/threonine-protein kinase roco6 OS=Dictyostelium discoideum OX=44689 GN=roco6 PE=3 SV=1
Q8SSS9	Probable serine/threonine-protein kinase qkgA OS=Dictyostelium discoideum OX=44689 GN=qkgA-1 PE=3 SV=2
Q5S007	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens OX=9606 GN=LRRK2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48013	DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000165	Biological Process	MAPK cascade	Interproscan
GO:0004708	Molecular Function	MAP kinase kinase activity	Interproscan