Gene detail

Detailed information of XP_081329630.1 in Orbicella franksi

Genomic Location: NC_138152.1:29587761...29608468
NR annotation: XP_020606504.1, uncharacterized protein LOC110045249 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_081329630

ATGATCATGCCGGCAGAACACTTCTTTACCGTGAAAATGCTGCTTGTCGTTCTATGTATATTTATGTGGGATAAAAGGGACAGAGGCCTTGCTGCAAATGTTCCAGCCAAGGTTAAGGTACCATTTTCTACGGTGCGGGTGTTAAAAGGTTACAAAATATCATGTTCAGCAACTGGCACCCCGCCCATACAAACAAAAGCGATGTGGAACTCCAGCGTGATGGCCAGTGCGTCAGATGTCTTAACTATCCACCTAAACAAAGAAGGAAAGTACGTTTGCGAGGCAAAGAACCAGTTTGGGAAGGACAAGAAAGAGTTCTCAGTCAAATTCGCTGATTGTGGACCACAATGTTCCCAAGGCGACGGAGAGTGGTATTCTGATGATTATTCTCAATGGGGAAATACTTTGTCATGCAGTGATGTGAAATTACCTCGAGTCATCATGAACTGCGCTCCAACAATTGTTGATGTCTTGTACCTGACCAGAAGTAACTTGGACAATCTTCCTGTTGACATGTTCTGGAGATTCAGTAATGTAAAACATCTGTTTTTGGTATCAAGCAACATTCAAAGACTTCACAAGGATTTGTTTTCTCACCTGAAAAAATTGCAACAGTTGGATTTGTCTTTGAACGATATCTCAGAGATACCCGTGAAGTTATTTTCAAGTGTACCACAGCTAAATAGTCTAAATCTGAGCTCAAACAATATCGAAGACATCCATGCTGATGTCTTTTCCGCTCTTTCAGATTTAACTTACCTGTCGCTGTCTCATAACAAGATGAAAAAGCCACACCCTAACTTGTTCATGAACCTAACAAATGTGGAATACCTAGATCTTTCGTATAACCAAATCGACAACTTAACCGACACTTTGTTTTGCTGTGTGGAGAAACTGGAATATCTATTTTTGCAGCACAATCGGATTCAAGCTATAACAAACTACACATTTAGCAGTGCCAGGAATCTGAAATACCTATTACTTAGTAACAACTACATAGGTATTATTCCTTCATTTGCCTTCGTACACAATCGCCAGAAACTTGAAATCTTAGTGTTAAACGACAATGAGGTTGGAGAAGTTGAAAGAGACGCAATTGGTTTTGGTGATGACCTACCACCGGAAGGATTAATAATATACATGATCCGGACAAATCTTCCCGAAATTAATCTTTATTCTTTCCACGGGCTTCAACTTTCAGATTCTCATGAATTGGTCATGAACGATGAACTCATTGGCTACCTGCGATACTACACTGCCAGCGGCCGAGATCTCTGTAAAATATATCTGAATCCGAACGCTTCCACCACAAAAGAAATCAGTGTCTCCGCAAAGATTTACGAAAAAGCAAGATTAAGCATGGTCACTGCCTTCCTTGAGCTAGGATTCGAACAGGCTTCGCACAGATATGATGAGGAGAATCTCACGCATCATTATAGGTTATCGCCATGTCCAGAAGGAACGTATTCACTTGGAAGTCGAGGATGCCAAAAATGTCCTCCAGGAGGTTTTCTTTCTGACAGCGCAGCCTATGTTGCTCAGGAATGTCTACCATGTCCACTGGGTGCTTTTGTGAAATTAGACATCTATCCAGGAACGAGGTACAAACACTGCAGGGCTTGTCCTCGAGGAACGAATACCAATCAACAAGCTGGACTCATTGCTTGTACCTGCTTGGAAGGATTTCATCGCACTCACATCTTTGGCAAATGCGAGGAATGCGAACGTGGCGGCGTGCATGAAGGGCTCGACTGTACTAAAACTGACTTTTTGGATTTAAAACCCGGCTACTGGTGGGAATGGCAAAACGAGACACACAAAGAACGCTACAAGAATTTTACCCACAATCTTCTGAAGCCTGTAGCGTCCTTTGACAACACTTTCAGGGACTTCACATACGAAATGCCAAAAGCCACCAAATGCCCAAGAGAAGAGTCTTGCCAGGGGGGTGTCGCCTCCCTTGAAAACCCATGTAAGCCAGGCTACGAAGGTCCTGTGTGCGGAATGTGCCAGTTTGGTTACTACAAACAGCTCCAAGCGTGCACCAAATGCCCGACCAAGAGATGGATGGCAATACAGTTTGGAATCTTCTTTGGGTTTGTGTTCGTGATCATTGCCATTATGATTTGGTACAGCCGGAAGAAGACGAAGAAGGCCCAAGGACGCGCTTTGATAGATGTCATCTTTGCCAGGCTTAAGATTATCATTGGGTTCTACCAGGTCACTTATGGTCTGTTGGAAGCGTTCGCATTCGTTAAATGGCCTGATGTCCTGGAGGATATCTCGCGATATTCAGAACTACTCCAGTTGAACATTCTTCAGGTTGCACCACTTCACTGCTTGTTCTCCAGCCTCCACGTGGACGCATTCGGAAGCTTGTTTGCCAGCATGGGCTTAAATGCTTTTGCAATCATGTTCTTTGCCTTTATTTTTGGAGTGCGCTATGTGATGATCTCGGCGAGTGGAAGCCTAACTGAGGAGGAAAAATCCAACCGGATCTCGCACACAAAAGAGCTGATCTACAAGAATTTATTCTTCTTTTTGTTTGTGACATACCTGAGCACTTGTTCCAAAACAGCCAATGTCCTGCCACTGGCCTGTCGACGACTTTGTCGTGACAAAGGAGAATCCTTGTGTGACAACTACCTGAAAGCTGATTACGGCATACGGTGTCACGGGTCACGCTATCACCTGCTGCTGATTGGGGCTTATTTGAACATTATTTACATCATTGCCCTTCCAGCGTTCTCAATCACAGTGCTCTGGAGAGAGCGAAGAATGATCCTCGCCTCCAAGGAAGATCCAACGTTGCCAACAAGCGAAGACTTCTCATTGAAGAATTTGAAACCGAGCTCCTACAAAGAACTTGTCACCGGGCTGAGCTTTATTTACGAGAACTACAGCACCAAGTCGTGGTACTGGGAATTGATTGAAATGGCTCGTAAGATCACCCTTACATCAGGCTTGATCCTAATTGGACAGGAGAGCAGGGCTTATGTGGGCGCTACATGTGTCCTAGCTGGGCTGTACGGCATGCTCTTCGCCTTCAGGGTTCCCATCCAAGATGCGTTTGAGAACAAGATGATGGTGACATCCCTTGCAGTCACTTTTGTCAACCTGGGTATTGGTACTGTGAGTAGAATCCCTGCAGAGAACCGAGAGCCGTCAAAGGACCCATTGATGGACACAGCCATCTTTAAGATAACGGTGCTTGGAGCAAACACTCTGGTGATCGGCCAACTTGTTGTGGAGTACATATCATACCTGCTTCGCTTCCTCAAGAAATGGATAAAAAATCCACACTGGTCTTTCGCTTGTTGTCAGAACCTGCTTCTACCAGTGAACGATTTGCGAGAAGATGACAATGGGGGGCTTGTGGATGACGAGGAGCAGATGGTTAATGAAGATGGCCAAATGGAAATGTTCTCGCTCTCTATCGAAAGGCTCGAAAATCACCCTTCAGCCAAAGAGAACGAGGCATGCGCCATTCACCCTGATTCGAAAGAAGACGAGGCTTTCGCTATTCGCCCTGCGGAAAACAAGGATACGATGCTGGCTATGCACCCAGCAGCGAAAGAGAACGAAGCGTTCGTTGTTCACCCTTCGGAATTGGACAGCGAGGCAGATGTATTCCGTGTCAGTTATCTTGCTGCTAAAGCAAACAGGAGGTTTACCAGTCATTTGAAGGATGAAAAGACCTGCGCCGTTCACCCTACGACAAAAGACCACTTGGCTATTGATGTCATTCCTGAAGAACATGAAGGAGAACAAACACAAGTTGACAATGCCGCTTTGGAGGAAGGAGAAGTCTTCGCACAAGGCGCCAAATTGAACGGTCAAGTCGAGGAAGACGAGGAGGAAGAAGAAGAAGTCCCCCCGGTTGAGATGTGTGATCAAGAAGTACAAACGGATTTATCAACTCTGGAGATGGATGAGGCTGAGCTCTATGAACTGTTTGGCGAGCCGCTAGACGAATCTCTTTGGTCTCAGCCATCGACAGAAGACCAGGATGCCATCTTTCCAGACGGAAATGACGACATCAGCCAAGACATTGAGTCTACACCGGAACCGGATATGGACCAAGATGACTCCCATAGCCAAGGCCAAGAGGCTTCGCCGGAACCGGAAGTTGACCAATATGACTCCATTAGCGAAAACACTGAGTCTACGCAAGGATCAGAAATGGACCAAAATGACTCCAACACCCACCAGAGCAAAGAACCTACACCGGAACCGGAAATTGACCAAGTTGACTCCATCAGCCGAGACACCGAGTCTACACAGGGATCGGAAATGGAACAAAACGATTCCTACAGCCACCTCGGCAAAGAACCGGCACCGGAACCGGAAGTTAACCAAGACAACGAGACTTTCACAAGCGCTTTTTAG

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24366	IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan