Gene detail

Detailed information of XP_081329784.1 in Orbicella franksi

Genomic Location: NC_138152.1:17119755...17129063
NR annotation: XP_020617910.1, CUB and sushi domain-containing protein 1-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q4LDE5	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3
A0A1D5NSM8	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Danio rerio OX=7955 GN=svep1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07534	TLD	TLD	Domain	Interproscan
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan
PF00084	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR006571	Domain	TLDc domain	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan
IPR050350	Family	Complement & Cell Adhesion Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19325	COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-