Gene detail

Detailed information of XP_081331064.1 in Orbicella franksi

Genomic Location: NC_138152.1:12565886...12578495
NR annotation: XP_020604980.1, uncharacterized protein LOC110043815 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_081331064

ATGGCAGCTGCTGTACCGTCGCCCCTAGCTAGCAGCGTAGAGAAGACAAATGGAGCCAAGCTGAGCAGACTTCTGATAGATGGCGGAACAACGGTTCTGAGGAACGCTTTTGATAACTACCATCCTCCTGCAAATCTGGCTGCTGATCTTAACGTGCAATATAAAACCCTGCTAAGCCTCCTGCGTCGACGAATCCTCAATAAATGTCAATGGGAAAAACTGTTCCCTTCTAGTGGAGCAAAGCCAGACTCCAACTCTTTCGACATCACTCTTCTATTCTTGCTTTTGACCACCATTTGTGGACTATCCCCTCCTCTTTCAGGTTGGCACACTAAGCCACCTCCAAGTGAAACCTCATTTGAAGCAAATCTTGCTCGCATTAAGTTTTTCCGCAATGAATTGTATGGTCATGTGTCTTCCACTGGTGTTGATACTCCAATGTTCAAGGCCCTGTGGCAGGAACTTAGTGCTGTTCTTGTTGCTCTTGGGCTGGGTCAGGCGGAAATTGATAGATTACAGGCAGAGTGCTTTGGAGAGGACGATTACCTTGACGCGTTAATTGACTGGGCTGCTAGTGAACAAGAAATGAAGTCAGAGCTGAAAGAGATGAAACGAGATGTTAAGAAAGTACTTCAAACGCAGCTGGAAGATCGCAAAACTCAACACGAAAGTAATTTCAGGTTGGAGCAAGTGCATGAGATAGTGAACAAGACCAATCAAGCCGTCAATGAGGCCTGTCAGACCCAAGTAGAAGTCCACAGTTCACTTCAAGATACTTTCTCAAAACTGGATGAAATTCATCAAATCGAAAACAAAACCCATGACGCCCTAAAAGAAGTACGTCAGACCCAACTAGAAGACCACAAAACACTTCAGGATGGCGTTTCCATGTTAGAGGGAATATCCCAGACCCAAACCAAAACTCAGCAAGCCGTAGAAGACGTGCACGAAACTCTTGAGGCAGGTCTCCGAGAAGTAAAACAGGAGGTAGAGAACTTGAAGAAGAAGCGTGAGGTGGACGGAGCAGATGAATTGCTAAGAAACCTTGCTAAGTCCGAGTTCAAAGGAGACATTGAATACCATGCAAAGAGATTCCAGGAAGGAACCCGTGAATGGGTCTTCAAAAGAGTTGACGACTGGCTAGATGACCGATCTTCCCCAAACCGAGTGATGGTAATAAGTGGAAGTGCAGGGATGGGAAAATCAGTTATCTCTGCGATCACATGCAAACGAATGCAAGAGGCTGGTAGACTTTCAGGGAGCCACTTTTGTCAGCATAACAATGTACGTTACAGGAAACCTCAGCTAATGCTTCAGTCCTTGGCCTGTCATCTCAGTCGCGCTCTACCAGAGTACAAGAAATCTCTCGTGGAACAGCTGTCAAGAAATCTGGGCCCGGTAGACCTCAACAACATGGGCGTGGAAGACCTATTCGCGTTACTTTTCAAAGAACCACTTAACATTGTAGAAGACCCGGGAAGAAATACCCTAATGGTGATAGATGGACTGGACGAGAGTGAGTATCAAGGACGTAATGAGCTTCTCGATGTGATTGCAAATCAGTTCTCCAGGCTTCCTCAATGGATTCGATTTTTTGTGACAACCCGATCAGAAATTAACATCGCAGACAGCCTGAAGCATTTGCAGCCCATACATCTTGATGAAAATCAGGAAGAGAACTTGAGAGACATTCGGTTTTTCTTTGAAATGCGGCTGAGTCCCAAGATTGCGGAAAAGCAAAAAGATCTTCTCTACACGAAACTGGTTGAGAAGTCTGAAGGCGTTTTTCTTTATGCTTATTTCCTGGTAGATCACATCCAAGAGAATGTTCCACTTCTCACCCTTGAGCAGCTAGAGAGCATTTTACCGTTGGGTATTTCGTCCGTTTATCTTTCCCATTTCAAACGGTTAGAGAATGAACTTCGCAAAGAGCTGAAGATGGACGAAGACCAAGTAATGAAGTTTTTGTGTGCCTTTACCGTTTCAAGAGAACCAATGCCAATAGCGTTTGTTTCAAGACTATTAAACCCTGGTGGAAAGTCGTTGTCTGCTCAACGAAGAATAAACAGAGCAATCGCCTGCATCTCTTCCCTTTTACCGATTCGCAATGATTGTCTTCACTTTTTCCACAAATCGATCAAAGACTGGTTGACGAACACCTTGTGCTATGGACGACATGATTTCATCGTGGACGAGAAGGAAGGCCACGAGATTCTCTTCGAACTTTGCAGGAATGAGCTTGACAATATCAAGCGAAAGGCTGTACATGATTCCACCTTCAGTGACACTGAAAGGTACGCCTTGCAACATGGTGTCCAGCACATGATTGAGCTGATCGGATTGGGTGAAAGTCCAAGACCTTGTAATGTAGAAGAGCTGATTAATGCGTATGTGACCGATTTGGAGCTCATTTATGCCAAACTTTGTGTGAACAACACGGCTTCCTCTGAGGATATTTCCAGTGTTCAAAAGTACATTAAGCCAACCTTGCTCAGTGAGCCAAGTCAGTCTCTTTTAATTTCTTTGATAAAAGTGCTTAGAAAACACTCTTATTTGTTAAGAGAACATCCCCTACTTTGGTTCCAAAGTGTGATCAATGACGGACCTCCTGAGCTATCATCTGAAGCCGCAACCATCCTCGAAAACAGGCTTCCCACTGTGCCGTACTTTAAATACTTAAACAAGAAAGAAGAAAATGGAGCAGTTCAAGCCCGATTTTACTGTTCAGACACGGTGGCGTGTTTTGATGTTTCACCTCAAATGGACTACGTGGTGTGCGAATGCCGCGATGGAACAATCCACTTGTGGTCTCTCGAGACTGGTAACTTGGAATGGAGCCGACCTTCGTTAATTGATAGAGAGTTTCAATATGTGCATCCTAAAGGTGATGTAGTTCGTGATGGAGGCGCGTATCGTAGAATAAATTCTAGAATTCTGACATTTTACCGTTCTGTGGTTTTTCATCCAAGTGGTATGTCTGTTCTACCGGGGACCCTCAGAAGTGCTTATAGTCTCGAAGGAGACTGCAATTCCCTTTATCCTGATAGTAACTGCACATTTTCACATTGTGCTTTTCCTACAGACAAAAAAACCATTTTGACAGACCGTTTTGATGATCCAAAGGAAGTTGTTTTGTGGAGTATGGAAACTGGCCAAGAGCTAAGGCGCATAGCTTGGAGTGACGTTATTACATCTTTTGCTATTTCCCAAGATGGTTTACAAATTGCTTTTGCTGACGTGACTGGTTCCATCTACCTTGATGTGGCTGAAGGACAAAGACAACATTTGTTGAAGTGCGACGTGGCATGTGGTATGATGCACTTCACACAAGACAACAAGGCCCTTGTCTGTGGTTACCTCTCTTATAGGATAGAAGACGGCATCGGATATGGACAGTTTGGTTGGGTGTCTTACCGCAATCCGGTGTTGATCCTTCGTCGACTCAAAACTACCTTTCCACCTCCACGTGGAGTAGACTTCGTCTTGTGGCCCATTGAACAAAAGATCCAGGCTGGGGAATATGTTTTCGATGACGGTTTACTCTTGGGCAGGGTAAAAAACGTGCACAGTGTTTTTCCATCGTTAGAAACAGGATTCTACAAATGGCTTGATAATGGAACAGCATTGGTTGGTAGCCCATCGTTCAAGTACGTCGCGGCAATTCATGTTGGCTCGCTAAGTAAAGTGAATTATGCTTTCGCCAGACAAGTGGTCGAAAAAGTTGTATTTTCTTCTGAAGGAGATGTCATTTATTCCATTACCTCAAAAGATGAAGGTAGTGCCAGTGCGGTTCTAGTGACCGTATTCCGAATGTCAAGTCGAGAAATCTTGGTGGAAAAGTCTTTCACTTGCCCATCACTGTCGCTTGTCCCCGTGAAGGAAGGTGTTGTACTATGTTTGAAGCATAAAGTACCCGAGCTTTGGAATTTTGAGCTGACCGAGTGTATCCGACAAATTCCCAAACTAAAGGGAACTGAAAAGCTTATTCGTTTATCAGATGAGCTGATAGCCTGTGAATGGTACCGTCGTATAATAACACCTGAAGAATTATCAGATTTTGGTTATCCATCAGAGATAGAGGATTCCCTGGAACTACGTGCGGAAGATGACTCAATTGAAGAAAACGAAGCTCTACATCTCGCTAACTTCACCGATGAAGAAACTTCAGACGATTCATCAACGACAGACTCTTCTGCAGAATTCAGAGATTTTGTGATTAAAACATTTAATCGTTTATTCCTTGCGCTTTTTGTGGACATCGTCAACGTTACCAGTGGAGAGTGTGTTTCATCTATAAAGGCAAGGGTTTGCCCCAACGACGATGCATTTGTTTCATGCAATAGTCAGAACCAGCTGCTAGTTTGCAACTGCGAGGAATTAGACGATGACTTTTTTGAGGGGGAACAGTTAACCCTTAGTTTAAGAAACAACAACTCCTCTTCCTGTGTATGGAAAAGAAAAGACGAGCGGTACGACACTCGTTCTTTTACGCCATATTTCATGTTCTCCCCTGATGGAGAATTTGTAGTGACGTGGGCTTCCTTCAGTTCAGGCTATGGAGTGCACATTCTTGATGCAAAAACTGGAGAAACACAACGCACCTTGCTCAAAGACCAAGATGACATTGTTGATTGTAAGTTCGTTGTTAATTGCGAGTCTCTGGTTTGCTGCAGTAAGGACAACTTCCTTCGATTGTTTAACATCAGGTCTGGTGATCAACTCAGCGTGCTAGACATTGAGGAGCAACCCTGCTGTTTAGGAGCCTGTTTGGACAAGCCTCTTGTCGCCATTGGCTTATGGGGCGCCAGATTGAAATTCGTGCATGTCGAGTTGCCAGGTGTCCAGGACTCTGAAGGGAAGAAAGGTGAGAAATCATGGCTTCATGATACTGTTCTGAGTGATTTCTTTTGGCCAGTTCTATCATGTATGGCTGATAAATAG

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46844	SLR5058 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan