Gene detail

Detailed information of XP_081333370.1 in Orbicella franksi

Genomic Location: NC_138153.1:30630218...30637287
NR annotation: CAH3015493.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_081333370

CAATCTGCCATTCCAGGGAAAAATATCGGTTACGACGTTTATAAGGAAATCAAGGGAGAAGAAGACTTTGACAGGAAAATTAAGGAAGCAGATAAGATTCCCTCAAGAAGCATTTTTGATGGTGCTAAGCTCAGGGTCGAGAAAGAGAAAATTAAATTTCTCTTCGGTGCTGCTGCAATGTACACTGGGAAACGACCTACTCATGCGATCGGCGTTGGAGCCCAGGGCTTCGCAACAATTGTAGCTGCGCCCCAGTTTCCTGAGTGTGAGTTCTTCACTCCTGGCCGAACTTTCCCGGTGTGCGTTCGACATTCACTACTTAAGTCCATCGATGATGCAATGTTAGATTTCTTGAGCGCTTCTATCCGATTTGCTGATAGTAATGACGACTCCCCACTTGATATTACAATGTCGACCGGGAGAAGCAGCGTATTGAGTAATGTACAGTCGATATACAATGCGCTGAAAGCTAATCGGAGTGGTAACGTGAAAGACTTTTACCTGGATAGTCCTGATATTTGTCTAGCTTTCCTTCCATTTCAAGACCAGCCAGCAGCCATAAGAGGCCAACGCATCCTTGAGGTACAGCAACGAAAAGAGCAGTACCTCTGGGGACAACTCCCCCCTGGTGTGACTGATTTGCCAGGCTTCATTCATGCTCCCAAACACAATGATCTCCCTAAAGACGCCCAGTTTTCCGACGAGAAGACACGATCGTTCCTCCATGGTTGTCTTGACGGGGTTGCAAATCTTGGTCTTTCGTATCTGTACACTCTTTGCGACAGCTGGGAAAATTTTGACAGCTTTAAGAAGATCTTCACTGGTTGGACAGGCGATGTACCTAGAATTGCCAACAATGACCTGTGGAAGGAGGACAGAATGTTTGGCTTCCAGTTCCTCAATGGTTGTAACCCATGTGTCATTGAACGATGCTACGAATTACCAAGCAACTTCCCTGTCACAAACGAAATGGTCCAAAACTTTCTTGACCGAGGGAGGACATTGGAGGAAGAAATTAAGGCCGGTCACGTTTACATTGTCGATTACAAAGAACTCGAGGGTATCAAACGTAATGGCGAGGACGGCAATTCTACGCTATTTTACGCAGCGGAGCCTCTTTGTTTATTTTACGTGAAGAGCTCTGGGGATCTTGTGCCTATTGCTATCCAGCTGTTCCAACAACCCAGCATGACCAACCCCATATGGACCCCCCAGGATTCACATTATGATTGGCTGCTGGCAAAAATGTGGTTCCGAAACGCTGACCATCAAGTACATCAGATGGGGACTCACTTATCCAAAACTCATTTGCTTATGGAAGCGTTTGCTGTTGCCACATGGCGTCAGCTGCCATCAATCCATCCAGTCTTCCAACTTCTGTTTTCTCACCTCCGCTATGTCATGGCCATCAACACCTTGGGAAGAAATGAACTGATTGCACCAGGAGGTATCGTGGACAAGACTCTTAGCATAGGAGGTGGAGACCACATTCAACTGCTAGAAAAGACGTACAAGAATTTCAAATTTGAGATGCTCTCTTTGCCAGACATGTTGAAGAAGAAAGGTGTTGACGATATTGAGAAGTTGCCAAATTATTATTACAGGGATGACGGACTTCGCTTGTGGACAGCCATCTCAGATTTCATCCGGGAATTCATCGGCATTTTCTATCAGTCAGATGATGACGTATCCAAGGATTACGAAATGCAGTCCTGGGTGAGAGAAATCCACGACGATGGCTTCCCTGTTAGAGAAGGTGACGTAGATCACGAGTTTCCCGAGAGTTTGCAAACACGTGATCAGCTTGTTCACATGCTGACCTGTGTTGTGTTCGCATGCTCGTGTCAACACGCAGCGGTCAACTTTTCCCAGATGGAATTCACAGCCTTCATACCAAATGTTCCGTCAGTCATACGTCTGCCAGCAACCACAAGGAAAAACCAGGCGACTCTGGAGCTCATCATGGATACTCTGCCGAACAAGAGTCAAGCTGGTTGGCATATTGCTGCTATGTACGCTCTGACGCGAGTATCGGAAGACGAGCGTTTCATCGGAGACTACTCCAAAAGTCCCTTGATAGGCAGTGAAGTAGAAGACGCTATTTCTCGTTTCCAGTCTTCCCTGCAGAGAATCTCTGAAGAAATCCAAGAGCGCAATGCATCAGTGGAATTTCCTTATCCTTACTTGTTGCCAGAGAGGGTGCCAAACAGCATTGCGATCTAA

Transcript

Protein

Uniprot

Uniprot term	Description
O16025	Allene oxide synthase-lipoxygenase protein OS=Plexaura homomalla OX=47982 PE=1 SV=1
P12527	Polyunsaturated fatty acid 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3
P48999	Polyunsaturated fatty acid 5-lipoxygenase OS=Mus musculus OX=10090 GN=Alox5 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00305	Lipoxygenase	Lipoxygenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036226	Homologous_superfamily	Lipoxigenase, C-terminal domain superfamily	Interproscan
IPR013819	Domain	Lipoxygenase, C-terminal	Interproscan
IPR000907	Family	Lipoxygenase	Interproscan
IPR020835	Homologous_superfamily	Catalase superfamily	Interproscan
IPR001885	Family	Lipoxygenase, mammalian	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11771	LIPOXYGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016702	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0034440	Biological Process	lipid oxidation	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan