Detailed information of aacu_s0001.g262.t1 in Acropora acuminata

Genomic Location: sc0000001_pilon:3817190...3831842
NR annotation: XP_015754913.1, PREDICTED: replication protein A 70 kDa DNA-binding subunit-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5FW17Replication protein A 70 kDa DNA-binding subunit OS=Xenopus tropicalis OX=8364 GN=rpa1 PE=2 SV=1
Q01588Replication protein A 70 kDa DNA-binding subunit OS=Xenopus laevis OX=8355 GN=rpa1 PE=1 SV=1
P27694Replication protein A 70 kDa DNA-binding subunit OS=Homo sapiens OX=9606 GN=RPA1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16900REPA_OB_2Replication protein A OB domainDomainInterproscan
PF04057Rep-A_NReplication factor-A protein 1, N-terminal domainDomainInterproscan
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF08646Rep_fac-A_CReplication factor-A C terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007199DomainReplication factor-A protein 1, N-terminalInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR004591FamilyReplication factor A protein 1Interproscan
IPR031657DomainReplication protein A, OB domainInterproscan
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR047192DomainReplication factor A, C-terminal, eukaryotesInterproscan
IPR013955DomainReplication factor A, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23273REPLICATION FACTOR A 1, RFA1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0005662Cellular ComponentDNA replication factor A complexInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0007004Biological Processtelomere maintenance via telomeraseInterproscan
GO:0043047Molecular Functionsingle-stranded telomeric DNA bindingInterproscan
GO:0051321Biological Processmeiotic cell cycleInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07466RFA1, RPA1, rpa; replication factor A1-DNA repair and recombination proteinsko03400deepkoala

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