Gene detail

Detailed information of aacu_s0001.g90.t1 in Acropora acuminata

Genomic Location: sc0000001_pilon:1514972...1518804
NR annotation: XP_044173301.1, uncharacterized protein LOC114955874 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0001.g90.t1

cttcttggtttgtacacattctgaccaaccgtttggtggaaaagatccttctgaactggccattaaattgtatggtaccctagacacaaaaacatatagctcacaactatgcgatgatgtttttgtcgtggataatactaaatcgggtatgcaaacggagtgctcaggagtacagcgcttgcgagaacgtattttagctgttgccaatgagctaccccacacgaaagaagatattccgatcaagtggttaaagtatgaaaaggcgctccaggttatactggctgaaggccataagtggatcactattgagcacgccaaacggatcgcctctgaagtttgtcaaattcatgacgatcaagagtttataacagtgcttgactttttgcatgatcagcgaattttaatacattttgatgacactgttgagctcaacaagttagttgtgttggatcctcagtggttgatcgatgtgttcaagacagtaataactgttaagcgttatgaccagcaagaaagaggatttaaggatttgtggcttaagctagaaagagaaggaatcctggaagaaaaactcctccggcacgcgtggagttcaatagtcgaagagcagcacacctttgaaagcctcattgcaatcatggagaagttcagtttgttgtgctcttggtcttcatcagatgagccatgtagtaagaagtatctagtgccgtccatgttgaagtggcatccaccccgggagatcaccaaattgattgcctcggcaagaatcccttcccttttcctcaagtttgaatccggtcaagttccatcaaatctgtttccacgacttgtgatccaattccttcagtgggggaaaaatgaattttggagcacagcgaatcctcagctgtataagaatttcgccagattttacactgctgaagacgaaaacttctcagttgtactcttatgccattcctctttaattgaaatcgttattcatggagggaatgttcgtccgctaaaagatgacttgcaagcaaatttaggcatgtcgttcggagatcaacgcgattcatttgacgtattctgtgctcgtgatgttttcagacagctcgtgttgttgcttgagtgcttgcgtaaagagttttgttggttgaagacaatgaaatatcaagctggagtgatttgtccggtttgttgccataaaaggcttgtcaagtattgccacactcatgacaagcaagattgtgagcgggaagaatgtcttcatttcatacctgagtcagagctgcgcaatgcaaatcgcgctatcacttgtaccaggtcggccgttgcagtagataaagtttgcatcaaagatttttcagcatggtttgccattccacataaggagggtgacaagtcacttgctcttcccggcaacattgttgaatcactagtgtctgcgtcatgtgatccaaaagaaattgtcctgcaactgaaagaaaacctacacttgaacaaaacggatttaaagcgacctacGcccgaagcaacgagaatgatccgttgtcttgcagcGacagctaaggaatcaaaccgggttgaggtTgtcaaacacctgagagaaatcacaccagcagggacaactggtccattgttacctgggaaccttgatatttgcaatatcccatcggagcagatgagagaacttacaatagatttgagcggaggagaagagtggaaggttgttgcggagagactgggcttaaacgcaaaagagattcggtaccttgatgtaagaatgcggaatccttgtgatgctgcgttgtcagttgtgagtcaaaggcgttgcatgaatgtggacgacctgtacgatgtgttaaatgagtgtgggatgcctgtgctggctgatattttgtgacctgtggactgtcgtataggtgaagaaatggcgtctacgtaacagttcttctaggagccaggagatatttaaagaagcatcctcaggtgtatgcctgctagaagagttttgaatgttatcatttgcatattgtcatcttacagcaaattaTGAGTCTATGTATAGAAGTTGTATTAATGTTACTTAAATGACAATACGTGTTAAATAGTGTGTTTCGTTGCAGGTTATATTTACGATCATGTAACATAGGAAAAATCCCTACACAAGGAACCAAAGAATATGAGTAGGATGAAGTGCTTATTGAAGACAATTTATTAATCAAGATTTTCTTGAAGAGTTTTGTCTTTCTGTTTTTAAACGTGCACGTTTTTCAGTCAATGTAAAAACGTCCAACGTTCTTTTTTAATCAATCATGAGTTAGCGATACTGAGGTTTTAGAAAACGTGCTCTGGGGCTATACAACATGAAGCCGCTGACTTCTTGATTTTGCTCAATAACTACTTTTTATAATTATGCAGACTTTTGAAGTCGTGAATTTATGCAAATAGATCAGCTACTCAGATAAAGACCATGGTTTCACATAAACGTCTAGAATTTTAAAGGATagaccttggacgagttgttcgaagcaaggttagcgctaattgtgggttaagtggaatccaaaacccagaggttgccattagacataaccctgtttggcgttaaccctacttcgaccaacttggctctgggctaATATAAGTTAATCAATTTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan