Detailed information of aacu_s0002.g104.t1 in Acropora acuminata

Genomic Location: sc0000002_pilon:1566847...1595772
NR annotation: XP_029203565.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114967668 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8IXF0Neuronal PAS domain-containing protein 3 OS=Homo sapiens OX=9606 GN=NPAS3 PE=1 SV=1
Q9QZQ0Neuronal PAS domain-containing protein 3 OS=Mus musculus OX=10090 GN=Npas3 PE=1 SV=1
Q24119Protein trachealess OS=Drosophila melanogaster OX=7227 GN=trh PE=1 SV=4
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00989PASPAS foldDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF14598PAS_11PAS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001610RepeatPAC motifInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR013767DomainPAS foldInterproscan
IPR000014DomainPAS domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23043HYPOXIA-INDUCIBLE FACTOR 1 ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09098NPAS1_3; neuronal PAS domain-containing protein 1/3-Transcription factorsko03000deepkoala

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