Detailed information of aacu_s0003.g105.t1 in Acropora acuminata

Genomic Location: sc0000003_pilon:1670648...1698486
NR annotation: XP_029197633.2, LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q01705Neurogenic locus notch homolog protein 1 OS=Mus musculus OX=10090 GN=Notch1 PE=1 SV=3
Q07008Neurogenic locus notch homolog protein 1 OS=Rattus norvegicus OX=10116 GN=Notch1 PE=1 SV=3
G3I6Z6Neurogenic locus notch homolog protein 1 OS=Cricetulus griseus OX=10029 GN=NOTCH1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00066NotchLNR domainDomainInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF07684NODPNOTCH proteinFamilyInterproscan
PF06816NODNOTCH proteinFamilyInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000800DomainNotch domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR008297FamilyNotchInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011656DomainNotch, NODP domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR010660DomainNotch, NOD domainInterproscan
IPR035993Homologous_superfamilyNotch-like domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12916CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0050793Biological Processregulation of developmental processInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02599NOTCH1; Notch 1-Endocrine resistanceko01522deepkoala

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