Gene detail

Detailed information of aacu_s0005.g11.t1 in Acropora acuminata

Genomic Location: sc0000005_pilon:176548...179855
NR annotation: XP_015749067.1, PREDICTED: protein phosphatase 1 regulatory subunit 3B-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0005.g11.t1

tgcgttttgattggttgacctactactagggtaaatgttatagcccaccagtaacgaaaagcacccgtattgttttgtcgccaaaaaagaatttaaatctagctgcaagcgcaagatgttttgtctcgataattttttttactaaaacaattattcctctcgcccacatggcctctgagtcaatagctcattcgccttcgacctcatgggctactgactcagagcccattcgcggctcgaggaagaattgttgaatTAGGCCTCGAAATACTCGGGGTTTGCCCGGGGAGGGAGTAGTATATGTTGAAGATTCGATTTGATCAACGTATTAGCGGTCATTAAGACTGAGAGAAAATGAGTTAGTCGACGAGTATGGAAACTGAAACTGAAAGTTTACTTGATTTATTTGTTTTTCTCCTTATAAAATGGCACGAAAACGAAACGTTTGTAAATAAAATACATTTTTATCGTCACAACAGAAGAATAATTCATCAACCAATGAGAGTGCGTGCATTATTACCCACTTGTGGTCGCTGTGTGCGTGATCGCTTGCACACATGTGACAAAACTCTAAGGAACTCTTCTGAGAGAAGCGAGAAGATTTGACCAAGGGATTTCATGTCACAACTACGGAAATCTTGGGACCGATATGAGAAAGGTGCATTCTGTGTTTCCTCCTTTTTCAGACGATGATGAACTGGACGGCAATGGAGATGGAAATGGCTGCCATTCCATACTTCGCAACCACAGTCGATCGCTTCCGCCACGAAAAAAAAGCGTTCAATTTGCGGATGGGTGTGGAAAGCCTCTCGTTTCTGTTTACAGCGATGATGAATACAACATCCATATGGCGTTGCAAATAACGAAGCGAGAACTTCAGCGAGCGAAAAAGACTTTACACCTCCTTTTCTCTCAACCTGTTGCCTCGGACGATTTTCGAGCAAGACTTGAAGAGCAGAGTGTTTGTTTAGAGAATGCTGTGGCCTCGCAAAATTCTGTCTGGGGAACTATAAAGGTGAAAAACGTATGTTTTCACAAAAAGGTTCTGGTGCGATATTCTTTAGACCACTGGACTTCGAGCATCGATCTGGACGGCGCTTACGTTCCCGATTCAAACGATGGAGCCACAGACAGGTTTTCGTTCGCACTTACACTACCGGAGTATTTCCTTGCAACGGGTGGTATGTTAGAATTTGCTGTTCGCTTCGAAGCAGAAGAAACAGAGTTTTGGGACAATAACAATGGGCAGAATTATCGAATCGAGTGTCGGGAAGCGCCTCCTCGTGGAATCAACAGAATGGCCAGTCTATTTCGGGACAATCATTTCACAACATAAAAACGTTTGTGATAAGACGGTATATCGTTAGGCGCTTGAATGATGTTGTAAAATGCGTAAAAAACTACTATGAAAGTATCGTGAAGGAAGCTTTCGACTGCACTCGCTCTTGATTTGTTTAGTTCCGGTGAAAGAAGGCTTGCATAACTTTCACTTATTATTTGTCTTCGTGGAAGTGTACCTTGATCGTAAAATTTGGTCGAATCTTGCATTTTAGTTGGAACTAGATTTCCAGTTAAGGAAACTTTGAAAGTACGTTTTTGTTATTTAAACGGGGAAAGTGATTTTCAAAGGCTATCCTTGATAATATAATTCTGCAAGGAAGTTGTTTTAATTCATTGGCCATTTACATCAGCCAAGACTTTGATAATTGCTTTCCGACAATGGCCAAGTAATAAGTGTTTTGGTGTGTGATGTGGTTTTTCGAGGTCAAACAAGGGCGACTCAGGTCAGCAAGTTATAGTTAATTGAGGAGCACTAAGTTTTAGGCGTATTGTGGCTTAGATACTGTAGTTCATGCAAACTATTGGATTTGTACACGTCGGTACAGTGTTTTTGCAAGTGTGGTAACAAGAACAATAATTATTATAGAGGGATCAATAATGGGGAATCTGTCTTGATGTCATAATTTCTTTTGAAAATCCAGTCGGCTTGCTAGACTTTAGAACACAATGTTTAATACAGGCACATTAGAAATGAAATGTTAAAGTTGTTGCTTGAACATTAGTGGAGGACATATTATTCAGCTGCTGATCATGTTTGCTATTTATTTCTGTTTAAAAAATATAGGTCATGTGCTGAAAAGTAATCCCAAATATTGGTTCTGGTGTAAGAGATCCTGATAACAATAATAATAAGTATTCAAAGTTCCTTTGTCTCTCTCACCCATTGAGTAATAAGATTCCTGAAGTGAATTAGTGCATAACACTGACGCTGTGATTGTCTTGGGTTTATTAACTGGACAAAGGTCCTATTCCTTTTTGTTGTTAAATTATGTTGATAATTCAAATAGTTTAAATTTTTATAGAGAATCTGACAACCTTGAAAAGCACAATACAAATAGAAAAAGATTATTTGTATTGTGGTTTTCCAATTTATCATATTCTTTGCATACATTGACTGATTGGGGAGAATTCTTGGTAGTCCTTCTGGAACAAGCAACTAATTATTACGTTAAGGTGCTATCTGCTTTCTGACTTTTTTCTTTAGTGGTTGGCATTACATTAAGGCAGACTTTGACTATGTGACTTAACATAATAAGGAATACTGTAACTGGGAAGGAGCTTTTTTTTCTAATTTGCAGCAAAGTATTAATACTTTTCTTCTTTAACTTTTTACATTGGCAAGATATCAAGTGTAGGTTGATTTTCATGATTTCACAAGATGAAAGGAAACATTTTAATTGATCTGTGGGGCAATTCAATGGGTGGTTGAGGTGGATGACATGGTATATCCTACAAGGTTGGAGGCACAATGATATCTTTGTAAAATACTGTCTCAAACCAGTTTTAGGCCGTGAAAATTAACTTTTTAAATTGAAGGACATCATTACTTTCATGTGAGTCCTTCCATCTATCACCCTATATTAGCCAATGTAAATTTGGCAGAAAATGGGTTGCTGTTTACCAAAGTCCTTTGACAAGGCTTTCATTTCACCATTAGTGTTATTTGTTGTATTTTTATACTGTTCACTGTAGAAATAGGATCATGGACATAACTGTTCACGGAAGTATTTTATAGCACATTGGCAGAAACTCGAAAGTTTGAAATCTGTTTCTGAAAGTTGCTACTTACTAATGATATTCAGCACTAATGACGGCTTTTGTGTAGGACGGTTTTTATCCCCCAAGGAATGAAAATTAATATGCAACATATAGAGTATCGGAAAACTACCTGAGTTATTTAACATTTTGATTAAGACTTATCAAATACTGTAATATATTAGATACACAAATAAATTAATTTTATACCA

Protein

Uniprot

Uniprot term	Description
Q0VCR4	Protein phosphatase 1 regulatory subunit 3C OS=Bos taurus OX=9913 GN=PPP1R3C PE=2 SV=1
Q9VVY3	Glycogen-binding subunit 76A OS=Drosophila melanogaster OX=7227 GN=Gbs-76A PE=1 SV=1
Q7TMB3	Protein phosphatase 1 regulatory subunit 3C OS=Mus musculus OX=10090 GN=Ppp1r3c PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03370	CBM_21	Carbohydrate/starch-binding module (family 21)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038175	Homologous_superfamily	CBM21 domain superfamily	Interproscan
IPR005036	Domain	CBM21 (carbohydrate binding type-21) domain	Interproscan
IPR050782	Family	Protein phosphatase 1 regulatory subunit 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12307	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000164	Cellular Component	protein phosphatase type 1 complex	Interproscan
GO:0005979	Biological Process	regulation of glycogen biosynthetic process	Interproscan
GO:0008157	Molecular Function	protein phosphatase 1 binding	Interproscan
GO:2001069	Molecular Function	glycogen binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07189	PPP1R3; protein phosphatase 1 regulatory subunit 3A/B/C/D/E	-	Protein phosphatases and associated proteins	ko01009	deepkoala