Detailed information of aacu_s0005.g248.t1 in Acropora acuminata

Genomic Location: sc0000005_pilon:3278103...3283716
NR annotation: XP_029199735.2, A disintegrin and metalloproteinase with thrombospondin motifs adt-1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
B3EWZ3Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR000483DomainCysteine-rich flanking region, C-terminalInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR018114Active_siteSerine proteases, trypsin family, histidine active siteInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR001314FamilyPeptidase S1A, chymotrypsin familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

TOP