Detailed information of aacu_s0006.g84.t2 in Acropora acuminata

Genomic Location: sc0000006_pilon:1204779...1229502
NR annotation: XP_044168710.1, MMS19 nucleotide excision repair protein homolog [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DCF2MMS19 nucleotide excision repair protein homolog OS=Xenopus laevis OX=8355 GN=mms19 PE=2 SV=1
Q9D071MMS19 nucleotide excision repair protein homolog OS=Mus musculus OX=10090 GN=Mms19 PE=1 SV=1
Q0V9L1MMS19 nucleotide excision repair protein homolog OS=Xenopus tropicalis OX=8364 GN=mms19 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12460MMS19_CRNAPII transcription regulator C-terminalRepeatInterproscan
PF14500MMS19_NDos2-interacting transcription regulator of RNA-Pol-IIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR024687DomainMMS19, C-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR039920FamilyDNA repair/transcription protein MET18/MMS19Interproscan
IPR029240DomainMMS19, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12891DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016226Biological Processiron-sulfur cluster assemblyInterproscan
GO:0097361Cellular Componentcytosolic [4Fe-4S] assembly targeting complexInterproscan
GO:0097428Biological Processprotein maturation by iron-sulfur cluster transferInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15075MET18, MMS19; DNA repair/transcription protein MET18/MMS19-DNA repair and recombination proteinsko03400deepkoala

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