Detailed information of aacu_s0013.g86.t1 in Acropora acuminata

Genomic Location: sc0000013_pilon:1317536...1332900
NR annotation: XP_015777225.1, PREDICTED: probable ATP-dependent RNA helicase DHX58 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6Q899Antiviral innate immune response receptor RIG-I OS=Mus musculus OX=10090 GN=Rigi PE=1 SV=2
O95786Antiviral innate immune response receptor RIG-I OS=Homo sapiens OX=9606 GN=RIGI PE=1 SV=2
Q9BYX4Interferon-induced helicase C domain-containing protein 1 OS=Homo sapiens OX=9606 GN=IFIH1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF18119RIG-I_CRIG-I receptor C-terminal domainDomainInterproscan
PF11648RIG-I_C-RDC-terminal domain of RIG-IDomainInterproscan
PF16739CARD_2Caspase recruitment domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR051363FamilyRIG-I-like Receptor (RLR) HelicaseInterproscan
IPR021673DomainRIG-I-like receptor, C-terminal regulatory domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR041204DomainRIG-I-like receptor, C-terminalInterproscan
IPR031964DomainCaspase recruitment domainInterproscan
IPR038557Homologous_superfamilyRIG-I-like receptor, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14074HELICASE WITH DEATH DOMAIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

TOP