Gene detail

Detailed information of aacu_s0015.g34.t1 in Acropora acuminata

Genomic Location: sc0000015_pilon:602660...614287
NR annotation: XP_029184451.2, lon protease homolog 2, peroxisomal-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0015.g34.t1

ATCTAGATCAGGACCATTATGGACTGCAAAAATTGAAGAAGAGGGTCATTGAGTATCTTTCAGTTCGCAAGTTAAAAAACAGCTTAAAAGGACCAATTCTTTGCTTTGTTGGTCCTCCTGGAGTTGGCAAGACTAGTGTTGGAAGATCAATTGCACATACACTTGGAAGAGAATTTCAAAGGATATCATTAGGTGGAATTTGTGACCAGTCAGACATCAGGGGACACAGGCGCACATACATTGGTTCAATGCCAGGGAGAATTCTAAATGCTTTAAAAAATGTTGGGGTTAAAAATCCAGTGATCCTTCTGGATGAAGTTGACAAGATGGGTAAAAGCCTGCATGGAGATCCATCTGCTGCACTTTTGGAAGTCTTGGATCCTGAGCAAAACTGGACGTTTGTGGACCACTATTTGAACATACCATTCGATCTTTCACAGGTGCTTTTCATTGCCACTGCTAACACAATCAGTACGATTCCTCCTGCACTTTTGGATCGAATGGAGTTAATCATGGTACCAGGTTATACTCAGGAGGAAAAGATGGCCATTTCGAAAAGACACCTTCTTCCTAAGCAATTGAAGGAGCATGGAATAACGAAAGACGACCTTGATTTTCCTGACAGCTCATTGCAAGCAATCATTTCTAATTATACTCGCGAAGCTGGAGTTCGCTCACTTGAACGGAAAATTGGAGGGGTGTGTCGAGCTGTAGCTGTCCAGGTGGCTGAAACCGTTGAAAATACACCAGAACAAGCTAAAGATAAAGCCGAGGAAGATCCTAAGGAACATGAAGCCACCAGCAAAACTGAATCTAGCGCAACTATCACTGGTGCTGCTAATAAAAAGGCCTTTTTGGTCACGGAGAAGTTCTTGACTGAAGTCTTAGGGCCTACTATGTTTGAGTCTGAAGTGGGGCAAAGACTGTCCACACCAGGAGTTGCAGTGGGGTTGGCTTGGACAGCAATGGGAGGAGAAATCATGTTTGTGGAAGCCACGCGGATGGGAGGAGAAGGAAAATTGACACTAACGGGACAACTAGGAGATGTGATGAAGGAGTCGGCTCAGCTGGCATTAAGCTGGCTCAGGAGTCGTTCAGTGGAGTACTGTCTCACGTCAGAGGACAGTGAGGACCTTTTGGAGCGAACAGATGTTCATATTCATTTCCCAGCTGGCGCAGTGGGGAAGGACGGTCCTTCAGCTGGGGTTACAATTGTCGCGGTACTTGTGTCACTGTTCAGCGGCCGATGCTCTCGATCTGACACAGCCATGACCGGTGAAATCACCCTAAGAGGTCTTGTTTTACCTGTTGGTGGAATTAAGGAGAAGGTTTTGGCCGCGCATAGAGCAGGCCTGAAGAGAGTCATATTACCAAGGCGAAACGAAAAGGATTTGACGGAGCTACCAGACAATGTCAAGGAAGAGATGGATTTTGTTCTGGCAAACAGAGTGGAGGATGTTTTACGCGCCGCTTTTGATGACGAATTTCCTGGCATGGCGCAGGCTACCAGTAGTAAGCTCTGACAGACAGCTACCAGATGGGTGTAAAGCAATTCTTCACCCGGCTCAAGTCGAGTGTAATTCCACAGAGCTTCAGAGCTGACAAAACGACGTTCCTTAATGGAGATTGGATACTGTTGTAATGCAAATCTTAAGCGGCTTGTCTTGATTATTAATCTGAAAGTGTAgttaaaggacctggcaaacgaggacacatcgtgacacattgttgctcatgatgtttcttgggcgcgcgcaaacgcgggggaatgaatgtcgtgtttccatgctgcgcaaactggggaacttttgttgcgggcacaaaatgtttctgaacaaaatcagaaacatcttttgtgtcccggaaacaaaatgagtccacaacaaatgttgcgcgcgcgcgggcaaacggggaaacatttgtgtcggcaacaatgtgtccgcaacaatatttAATGCCAGGGCATTAAAGCTATTGTAAAACA

Protein

Uniprot

Uniprot term	Description
Q5PQY6	Lon protease homolog 2, peroxisomal OS=Danio rerio OX=7955 GN=lonp2 PE=2 SV=1
Q9DBN5	Lon protease homolog 2, peroxisomal OS=Mus musculus OX=10090 GN=Lonp2 PE=1 SV=1
Q3MIB4	Lon protease homolog 2, peroxisomal OS=Rattus norvegicus OX=10116 GN=Lonp2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05362	Lon_C	Lon protease (S16) C-terminal proteolytic domain	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008269	Domain	Peptidase S16, Lon proteolytic domain	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR027065	Family	Lon protease	Interproscan
IPR008268	Active_site	Peptidase S16, active site	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10046	ATP DEPENDENT LON PROTEASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004176	Molecular Function	ATP-dependent peptidase activity	Interproscan
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005782	Cellular Component	peroxisomal matrix	Interproscan
GO:0006625	Biological Process	protein targeting to peroxisome	Interproscan
GO:0016485	Biological Process	protein processing	Interproscan
GO:0030163	Biological Process	protein catabolic process	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan