Gene detail

Detailed information of aacu_s0015.g94.t1 in Acropora acuminata

Genomic Location: sc0000015_pilon:1204683...1211405
NR annotation: XP_029188238.2, multiple epidermal growth factor-like domains protein 10 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0015.g94.t1

TATCCATGTGTTTTGTGGTCAAAGAGTCCACTAAGGACAAGCGCACGGCTAAATCAAGTGACATGCACGAGAGTTTGATCCGTGTGCAACTGTTTCCACACACAGAGACTGCAATTAGTTGTTCATAGTTTCTCAAGCGGGTCTGGAGAGTTACAAAACCTTCAGCTTATTTGAAAGATTTTATCAAGTAGAATGAAGCTGCAAATGGTCGGAGCATCTATACTCTTGCTGGTGTTGTTTAGTGTGGACGTCTTTTGCCTGTGTCCCCCCAAAACAGAGTGCTTTGGGCATGGCATATATGACAGAAAAAATGAAACATGCAATTGCTCCTCTTCTATAAAAGGAATTGGTCCATACACGGGCGAATGCTGTGAGAGCATTGGTTGCAAATCAAACGCCACATGTAAACATGGCTTCTGCGGTCCTGATGGCGTAACATGCGCCAAGTGTCAGACAGGATGGGGCGGTGTTAACTGCACAGAGGTTAAATCGTGTTTTTCGTGGTTTTCCTGTGCGCACGGGACTTGCGTTAAATCCAGGAGTACATGTGAATGTGAACCCGGCTGGGTGGGAGACCTGTGCGATCGAACAGTCTGTCTTGTGCGGTGTAAGTTTGGCTCATGTCCAAGTGACCCAACGAAGTGCGAGTGCCATGAACACTACTTTGGCACAGCGTGCGAAAAGTCAATATGTGGTGCTGGATGGGAATGCCACAACGGAGGTTACTGCATTGATCGTCGGCATTGCGCTTGTCCTCAAGGTTATACAGGACCTCACTGTGAGACTGTCAGTGAGTGCAGCGTACCCTGCAAGCACGGAACTTGTCCGCATAAACATGATTTGTGTGAGTGTGAACCTCATTGGGGACCTCCGGGGGAATGCAACATCTACCAAGGACCCTGTTTCAACTGCTCCGCGGTCGGAGGGAGTTGCAAGAAAGGTGCCAACACGTGCGAGTGCAACCCAGGATATTCAGGTCTCGATTGCTCTGCCAGAACCTGTGATGGGTGTGAACACGGGCGTTGTGTCGGTTGCAAGATATTTCCCCAAAAATGTAAATGCGACTTGGGTTGGAGGAACGAGCTTCATGTTCCTGGCTTTCACCCCTTGTTTGGACCCTGTAAGAACGTTCTTCAATGCATGGAGCCGTGCATCCACGGTACATGTCCAGACGACCCTTACATTTGCAACTGCACTGCGCCTTATGTGGGAAGCCACTGTGAAGTAATGAAGTGTCCAGTTTGCTGTCCTCCACAAACTTGCGACTGTACGAATCCAGACAGAGTTCAATGCCGCCCAAACTGGCACCACGACTGCTGTTTGGTTAAGTCCTGCTTCAGAGGGGACACTCCAGTGCACACTGACAAAGGTTTGGTACCGATCGAAAACATCAAGGAAGGCGACATGGTGGTGACTAGACATGAGGGAGAGAGTCATTCAGTGACGCACTTACGTCGCGTTGACCAGGTTCGGAAACGGTTTGTACCAATAAGGGAGCTTTTGGTGTTCCGAATGGCCGACGAAGACATCTGGGTGACTCCCAACCATCCGTTCTTTGATATCGGAACAAGCTCGTGGATAAGTGCAGTAAATGTATCAACTTCATATTCACTCCTGACATTAAAGGGCGCAGCAGTGAAACTCCAGCATCATCTGAAGGCCTCTCAGCTACTCGCGTCATCAGATGAAGCTGACAACCACGTAGCCGTTTATGACCTATCGGTTCACGAGTACGACCGATACTCAGTGGGAAAAGAGGGATTGCTGGTATCTGCGTGCGACAACTCCATTGACTTGACAACTCGGGATAAACAGGTTTGGGGTGAAATAGGGTATCCCAACCATGTGAGTGGACTTCAAGAAAAAGAGGTATTCGAGGCCAAGCAAGACGATGGCTCGATTCCGGTCGATTCAAGCGTGAATCGACCTGAAGCGTTTCACTCGAATACTAGCTACTCAAGTGTGAGCGTGGCGTTAGCTGTTACCGCAGTGGGTCTCATCTTTTTGGTACTTGTGTCTTTTATGACACGCAAGGGTTTTCGCGGTGAAGCTAAGTCAGCATGAGCCCTTGAGTTCCAGCAAGTTCTCTTCGTAGGAATTAAAGCTCACGACGAGAACGCCTAACTTTGTAACTTCAAATTTATTTATGTGTTTTGTAGTAAAAGCGGGTTATCTAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13403	Hint_2	Hint domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR006141	PTM	Intein N-terminal splicing region	Interproscan
IPR050906	Family	Notch signaling pathway	Interproscan
IPR036844	Homologous_superfamily	Hint domain superfamily	Interproscan
IPR028992	Domain	Hedgehog/Intein (Hint) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016539	Biological Process	intein-mediated protein splicing	Interproscan
GO:0005112	Molecular Function	Notch binding	Interproscan