Gene detail

Detailed information of aacu_s0024.g42.t1 in Acropora acuminata

Genomic Location: sc0000024_pilon:484554...487552
NR annotation: XP_029186524.2, neuralized-like protein 2 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0024.g42.t1

TGGGGCGTTGAAAATGGGCCTTTCTACAAAATGGGACTTAATTAGTCCTTTCATAAGACGCATTTTGTTGAAAACTTAGCGAGAGGGGATCAATCTTTCTCAAAAAAATGATGCGTTTTCATGAAAGACACGGAACACACGTCCAGTTATCTGCTTGCAAAACATCAGCCATGAGAGTAAAGAGCTTCGCTAATGCAGTCGTTTTCAGTCATCGTCCACTTGCATTCGGCGAAACATTTCTTTTTGAGATCGAGGAGCAAGAAAAGGATTGGTCTGGTCATGTTCGATGTGGAATAACGACTCATAATCCACGAACTATTGAATGTGTTCCTCCCTATCTGCTTCCTGACATGGCTCAGATGGGACGTACGTGGGTATTCGCGATCAAGTCCACTATGCAAAAACCATTAGGAGATGAACAGCTTAGAGACTACGGAAGCCACAACTATCAACGGCAAGAAGCTGGAGATAAGGACACTAACCCAATATTTTGCGGCCGAAAGGCTCGTGAAACAAAACTCAAACCGACCGATGTCGGATCACGTATTGGTGTCAAAGTTAGTGCAGCCGGAGAGTTGTACTTTTATGTGAATGGAATGAAGTTTGGGCCCTGCGCTCTTGTTCCAATCGATAAGGATCTATATGTTGCTGTAGACGTTTATGGAACGACAAAAAAAGTGCAGATCATTCAATGTGGAGTACACTCTCTGCTCGACTTGTGCTGTCAAAACATCCGGAAATGTGTGGCAAAAAACGACGATCTTGAATTGCTTCCTATAACAGAACAGCTGAAAAAGTATATAGCTACATTTTAAAAATGTTATCATTAGATAACAGAGAACAGATATTATTAAAGATAGCAACTGTAGACATTATTCAACATTATCACCGCCTAGCAAGGAACTGAGTACCCATGAAATACAAGATACAAAATCTCAGAAATAACCATAATACATGTATTTGCTGGTATGCAATATGATCCATAGGTACTGTAagtagataaattatgagcaggagatctgtatgggtgtttacagtggcaagctaaaggtgggccattgtaaatgcgcatacagattggacacaaatattttagcatacttgtgaaatgtaacaataggaaagatctgtatcaaaggttaatgattacgaattagctgagtaggagtcagtatcaaaagttaatacaactgatgaataattcatcaaccccagttgatttgtacagtcaaaccttgattatcgggactattcgattatccaaactttttttcctggccccgactttttcatgaatatcaataattagttgtgtagtagtcttgaaaagttgcaaaaagcccaagaatcttttcaaaacactgttgaaacagcgtattatcctatgcacttttcaaaattctcaagtgcaatgagacaaAGAATTATTTTGctgtataccttttgtttacatttctttctcattaatatttatattttcgattatccagactctaaattatctggactatttactgaggtcccagcaggtctgaataatcaaggattgactgaattggggctttacagaggtgcacacgggactcaaatactacccattgattggtcatcaactcATTAATAACagtaataatcataactatatcaaaattcttgaatctgattggtcatcggcagccctgattcgagccgtaattgtacagttgcacactcttgcgcttgtaattgtacacgtcatgcttgagtaattggacagtacgcgtcatcaagctcgcactagttgcacttgaatgggttctttctcagcacctagcttagaacttgaatataattatatcaacctctcaaatagtttataccactgtcatattcttctcgaattttgttatagttaagattaattagtaattggactttgggtcgtacaattcagggagtaattgggctcataatttcaaattggccaagcgcgaggccaattttgaaattacttgcccaattactccctgaattgtactccactcggtccaattactattacttattactgtTAATGAATTTTACAAACTGTGATAAAAGTGTAAAAAAGGACAGTAAAAATGTCCCAAAAAGTAGTTATTTTTTTCTTATGTCAAGTCCTTTGTGTCAGTCAGTCTGCCTAGGTGATAATGAAATTTTATATAATTAGCTAGAGCATGCTGTGGTTAACCCGTGATCTTGGACAAA

Protein

Uniprot

Gene family

Uniprot term	Description
Q9BR09	Neuralized-like protein 2 OS=Homo sapiens OX=9606 GN=NEURL2 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|SOCS

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07177	Neuralized	Neuralized	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043136	Homologous_superfamily	B30.2/SPRY domain superfamily	Interproscan
IPR006573	Domain	Neuralized homology repeat (NHR) domain	Interproscan
IPR001496	Domain	SOCS box domain	Interproscan
IPR037962	Family	Neuralized	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12429	NEURALIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16782	NEURL2; neuralized-like protein 2	-	Replication and repair	-	deepkoala