Detailed information of aacu_s0028.g111.t2 in Acropora acuminata

Genomic Location: sc0000028_pilon:1682171...1689813
NR annotation: XP_029201073.2, uncharacterized protein LOC114965536 isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q05048Cleavage stimulation factor subunit 1 OS=Homo sapiens OX=9606 GN=CSTF1 PE=1 SV=1
Q99LC2Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1
Q5R8K2Cleavage stimulation factor subunit 1 OS=Pongo abelii OX=9601 GN=CSTF1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox
Transcription Factors FamilyCUT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16699CSTF1_dimerCleavage stimulation factor subunit 1, dimerisation domainDomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF02376CUTCUT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051649FamilyCUT Homeobox Domain-Containing ProteinInterproscan
IPR003350DomainCUT domainInterproscan
IPR038184Homologous_superfamilyCSTF1, dimerization domain superfamilyInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR032028DomainCleavage stimulation factor subunit 1, dimerisation domainInterproscan
IPR010982Homologous_superfamilyLambda repressor-like, DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14057TRANSCRIPTION FACTOR ONECUTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

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