Gene detail

Detailed information of aacu_s0031.g52.t1 in Acropora acuminata

Genomic Location: sc0000031_pilon:1048760...1053854
NR annotation: XP_029195202.2, LOW QUALITY PROTEIN: ankyrin repeat and SOCS box protein 13-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|SOCS

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07525	SOCS_box	SOCS box	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR001496	Domain	SOCS box domain	Interproscan
IPR051573	Family	Ankyrin repeat and SOCS box domain-containing protein	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR036036	Homologous_superfamily	SOCS box-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24136	SOWAH (DROSOPHILA) HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0045732	Biological Process	positive regulation of protein catabolic process	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan