Gene detail

Detailed information of aacu_s0037.g94.t2 in Acropora acuminata

Genomic Location: sc0000037_pilon:1033154...1038687
NR annotation: XP_015771862.1, PREDICTED: zinc finger protein 143-like isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0037.g94.t2

AATATAAAACGAAAAGAAGCGGGAAATACAACCAGCTGATCGTTTTTGAGTAAAGGTTTTCCTCCTCCTTTGATATCATGGACTTGTCAGAAGGACAAGAGACTTTAGGAAGTATCAATTCAGAGGCGTTTTCGGAATCCTCGGAGGTTCTTTCAGAAGAAACAGGTTCTTTGATGACTTGTTCCTCAGGTGATTGTGCAGATGTCGATGCAACACCAGATAAAGAAGgtttgttgtatattcaaaGTGAAACTTCGCCTGTGGAAAATCAAAACACTCCAGTTCTTCTCTTGCCAAGGCGTGACTCTACAAAGAGCTCATCAAGAATGTTCCAGTGTGATTATGCTGAATGTGGAAGAACATTTAACACTGCTGCTCACCTGAGGTATCATAAGCGCACGCACACTGGAGAGAAACCTTATGCTTGCTCTCATGAAGGGTGTGGCCGAAATTTTACCTCATCGGGTTACCTTCGGTATCACCAGTGTACCCACAGTGGAAAAAGAACTTTTAAATGTCAACATCCCGGCTGTGATCGTGTGTTTGCATGGCCAGCACATATGAAATATCACATGAAAACTCATACAGGAGACAGAGCGTACCACTGCACTTATGAAGGATGCAACAAGAGTTTTTACGTCTTGCAGCGACTAAACGTTCACATGCGAGTTCATACTGGTGAGAGGCCTTTCACTTGCAATGTCGAAAACTGTATGAAGTCATTCACAACTCAAGGAAATTTGAAAAATCACATGCGAATACACACAGGCGAGAGACCTTATATTTGTACGGAGGAGGGATGTGGTCGAACTTTTACCGAACACTCGAGTCTTAGAAAGCATAAGTTGATACACACTGGAGAAAAGCCTTACGTTTGCGAGATTTGTGGCAAAACATTCAGTCAAAGTGGAAGCCGCAACGCGCACCAAAAGAGGCACAGAGACGTGAACAAAGATACGACAAACAAGAAGGTGCCTCAGAGCAAGGTGCTGTCTTCGTCTGTAATTGTACAAGGGGATGATAGAGGGCATCATGGAGAAATAATGTCTCATATTGGAAACATTGATGAACAAGGTGGAGAAGATGAGCATTCAATTTCATCGCAAGCACTGGTATATTCCCAAGATGACCATACCATCGTAACGCAAGCGACTGGGGATCAACTGGTGTTAGCTCAACCTATCGTTGCGAAGGAAGTATCCATAGAAACAACACCAATTCAGACGATGTCCCTTCTTGTACAAACGACTGATGATGTCATAAATACTGTAGATAGCCTCTCTCAGGCAACTGCTGACGTCACATCGCTTGCAGAAACAGTCGTCACTCAACAGGCAGTTATTCACACCATGCTAGATGGTGCCGCTATCATTCCCTCAAGCACCCAAGCGGAACTGTCAGTTGTGGATCACGTGTTACCCACCTCGAACGTGGAGCACATGATGCAAAGTGTAGTCAGCCAGCACATCCTTAGTGGACATATTCAAATACCACTGACGGATGAATTAGATGCACCACAGGGGCATCATGCCGGTACAGCACCTCATCTCACGATTGACTTGGGATTTATGCAACAAACACAGGAAGAAACTGCCCAGAACACTGACGAAGATATGGCAGCAGAGGACTGTTCTTAAAATAAATTCCAAGAGGAACACTTCCCCAAATCTTAGTTATTTACAAGTCGTATAATTAGGAACAGCGGAAAGCGGGAAATGCAGCTGTTATATTAGTTGTCCAGGCATTCCCACGAAATTGATGTTTTGTTGATTAGAAAGACAAATCGCTGCATCCATGCCAGGTCTTAGTATCAATAAAACTGAATAATATCGTTTGTGATTGCTTTTCTTATCAATGAAACGTTGTCTCCTTAATCCATTTTGGAAAATTTAAAATGTGAACGTTCATTTGTACACGTGCACTAAGGGGCGGCTTGAGGTAGCAATTTAACACAaacaccgtagagtggcaatatttcaagaccctatacatttcagaacgattaaactacaaaattttgaacattttccgaaaagaaaacatccagCACAGAGCGTAAATGTACCAGGAAAAAATGTCTCATTTCGGACACCGTCCTGTAAATGAAGAAGAGCCGTGTGGCTGTCTCAAACAAAATGCAAAAGCTGCGAACTATACAtaccgtatttactcgaataagcgccgtggcgcttatttaatttttcgcgccacaagtgcggcgcttatttaaacactgtaccagaaaaatttactttttTGGTTGCCTATACTTAATATAATTTATGTCTGGAA

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR050331	Family	Zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16515	PR DOMAIN ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20828	ZNF143_76, STAF; zinc finger protein 143/76	-	Transcription machinery	ko03021	deepkoala