Detailed information of aacu_s0045.g123.t1 in Acropora acuminata

Genomic Location: sc0000045_pilon:1764959...1782523
NR annotation: XP_015765037.1, PREDICTED: recombining binding protein suppressor of hairless-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P31266Recombining binding protein suppressor of hairless OS=Mus musculus OX=10090 GN=Rbpj PE=1 SV=1
Q5RFK6Recombining binding protein suppressor of hairless OS=Pongo abelii OX=9601 GN=RBPJ PE=2 SV=1
Q3SZ41Recombining binding protein suppressor of hairless OS=Bos taurus OX=9913 GN=RBPJ PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyCSL

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09270BTDBeta-trefoil DNA-binding domainDomainInterproscan
PF20144TIG_SUHTIG domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038007DomainRBP-Jkappa, IPT domainInterproscan
IPR015350DomainBeta-trefoil DNA-binding domainInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR036358Homologous_superfamilyBeta-trefoil domain superfamilyInterproscan
IPR040159FamilySuppressor of hairless-likeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10665RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001228Molecular FunctionDNA-binding transcription activator activity, RNA polymerase II-specificInterproscan

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