Gene detail

Detailed information of aacu_s0047.g39.t1 in Acropora acuminata

Genomic Location: sc0000047_pilon:942450...947552
NR annotation: XP_015774642.1, PREDICTED: uncharacterized protein LOC107352838 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

aacu_s0047.g39.t1

ATGGATGTTTCTGCTGTTATATCTGCCCCGGAAGGGTTTCTAGAGCAGTTAGGACTTTCTAAGGCAGGAGATAGACTAAACCTGGTTGCCTTTTGCAAAACCACCAATGAAAGGCCTGAAAAATCACAAGACAAGAAAAAGGCACTACTTGAAGCCTTTCTCTCAAGAAAAAAAATGAAAAAATCATCACAAAAAACCAATGAGCGTAAAACAAGTCAAGAGAAGAAAGAGAAAATCAAAAGTAAGCAAGTGCATCTTGGCTGGAAACACTTCAGAGAACAAGATGATACGTATGTCCTTGTCCCTTTATCGAAGGGAGGTGGCAGTCGAACAGTTGATGTGCCGGTTACTATAACTAGATTTGAATTGTACCAAACTTGCAAAAGCCTTTTCTTCCCTGATGGACAATCAGTGTTTGGACATGCTGATGACATGCTGTTGGATCTGACCAATTTTAAAGATGAAAAGATTGGTGATACTGTAAATGTTGGAGGTAACTGTTCAGTCCCATTCAACATTGCAAACTACATGGAAGCTCACAAGATAAAAACAGTAAGACTTTACCGGCGGTCCAAAAAAATATCAACTGACAGTGATGACGAGCTGTTCTGTTCACCCTTTGATACACAAGATGTAATGCCACTGGTAGGGTTGAATGAGGAGAGCTATCTAATTGATTCATCAGAAGATAGAAAGAATCTAAAGGAGGAACAGGATGAAGCATATCTAGTCTCATTACTAATGGATCAGAAGAAGCAAGCTGATCTagaaagaaagaatgaagacaaaaagcgtaaagaaagaCTACAGAGGGCCAGAATGGACAGGGTACTTCTTGAACCCAGTAGTGATTTTGTAACGGTGAAGATTAGACACCCTTCATTGGGTTTACAGTCAAGAAAATTTGCAACCCACACACTGATGAGCTCTGTTTATGACTGGGCAGGTTCTTTGAGTACTGAACCAGAACACTTTACACTCAATGATCCTTTGGGGATTATGCTACCACCAAGTAGCAAACTGTGTGACAGGTGCACATTGACTATGATTGAGTCTGAAGAGGGTAGCCCTTCACTGATGGCTTCTGATGATGAAATTGCTTTTTTGGGGTTTGGTCAAGCAGTAGATACAAGTGACTTCAGTGCTGGATGGTTTACGGAGTTTGGAACAGAATTTCCAACAAGTCAAGAAGCACAGCATTCAGTGTTTGTATTATTTTTTTTGGACTTATGCAGCTTACCCGGAGTTTCTTTTTTCTTTATTAGCCATGCATCCGCAATTCAGGACAATCCTGCCCAACCACAGTCACCATCCGTCAGACTCATCAGAATTCGGAGGGTCCAGGTTATGTCTGATATGATTGAAGTATTTAAGGATCCATCAATTATGGCAGCTCAATTAACAGTCAAAATGGTTAATGCTCATGGCCAAGAAGAAGCCGGGACGGATGAAAATGGAGTTTTCAGGGACGCACTGTCAGCATTCTGGACAACATTTGAGAATTCATGCACAGTTGGAGAAGATGAACGAATACCAGTCATTAGATATGACTTTCAGGCTCCAGAGTGGGAAGCCATTGCTAGACTCCTTGTTAAAGGATTTCGTCAGCTTACTTTTTTTCCTGTAAATTTAAATAGGGCATTCCTTATTGCCACAATTTTTGGGGAAAGGGAGGTGACAGAGCAAGTCCTTCTTGATTCTTTCTTAGCCTATCTATCTAGGGATGAAAGGGCTTTGGTTGTGGATGCTCTAAATGGGACTTTGGAAGATGAACACATTCATGAGTGGCTTGATTTCTTAGATAGATTTGGATGGAAGCGAGTTCCAAAGCCTGAGCAGTGCAGGGATACAATTTTAGAAATTGCTCACAAGGAGCAAATACAAGCCTGTCAGTACATCATTAATTGCTGGCATGAGCCATTGTGTAGTTTGAAGACAGCCGCATTCAACATCACGGAACTTGGAAATTTACTAAATAGAGCCATTCCAACAAACAAAAAGGTGATCGATCTCCTTGAAGTCATCCCAGAGCCACAAAATAATGCCCAGAGAGATGCGATATCCTATCTTAAAAGTTACCTGAGAGGTCTAGATAGTGAAAGATTAAGGAAGGTTTTACGTTTTCCTACAGGAGCTAACATCATTTGTGTGGACAAAATTAAGGTTACATTCACCAATCTTGATGGCTTTGAGAGGCGTCCCATAGCTCATACATGTGCCCCAGCTTTAGAATTGCCCTCAACGTACCAAAACTTTGCTGATTTAAGACAAGAAATGAACAGCATCATTGACAGTGAATTCTGGGAAATGAACATTGCTTAA

Transcript

aacu_s0047.g39.t1

TTACAGGCTTAATTTTTGTAAACCTATTCAAAATTTATTCCGACCTTTACGATTTTCTTGCTCGCGCTTACTTCATTTTCTTGTCAACTTACCGATTTAGATGGATGTTTCTGCTGTTATATCTGCCCCGGAAGGGTTTCTAGAGCAGTTAGGACTTTCTAAGGCAGGAGATAGACTAAACCTGGTTGCCTTTTGCAAAACCACCAATGAAAGGCCTGAAAAATCACAAGACAAGAAAAAGGCACTACTTGAAGCCTTTCTCTCAAGAAAAAAAATGAAAAAATCATCACAAAAAACCAATGAGCGTAAAACAAGTCAAGAGAAGAAAGAGAAAATCAAAAGTAAGCAAGTGCATCTTGGCTGGAAACACTTCAGAGAACAAGATGATACGTATGTCCTTGTCCCTTTATCGAAGGGAGGTGGCAGTCGAACAGTTGATGTGCCGGTTACTATAACTAGATTTGAATTGTACCAAACTTGCAAAAGCCTTTTCTTCCCTGATGGACAATCAGTGTTTGGACATGCTGATGACATGCTGTTGGATCTGACCAATTTTAAAGATGAAAAGATTGGTGATACTGTAAATGTTGGAGGTAACTGTTCAGTCCCATTCAACATTGCAAACTACATGGAAGCTCACAAGATAAAAACAGTAAGACTTTACCGGCGGTCCAAAAAAATATCAACTGACAGTGATGACGAGCTGTTCTGTTCACCCTTTGATACACAAGATGTAATGCCACTGGTAGGGTTGAATGAGGAGAGCTATCTAATTGATTCATCAGAAGATAGAAAGAATCTAAAGGAGGAACAGGATGAAGCATATCTAGTCTCATTACTAATGGATCAGAAGAAGCAAGCTGATCTagaaagaaagaatgaagacaaaaagcgtaaagaaagaCTACAGAGGGCCAGAATGGACAGGGTACTTCTTGAACCCAGTAGTGATTTTGTAACGGTGAAGATTAGACACCCTTCATTGGGTTTACAGTCAAGAAAATTTGCAACCCACACACTGATGAGCTCTGTTTATGACTGGGCAGGTTCTTTGAGTACTGAACCAGAACACTTTACACTCAATGATCCTTTGGGGATTATGCTACCACCAAGTAGCAAACTGTGTGACAGGTGCACATTGACTATGATTGAGTCTGAAGAGGGTAGCCCTTCACTGATGGCTTCTGATGATGAAATTGCTTTTTTGGGGTTTGGTCAAGCAGTAGATACAAGTGACTTCAGTGCTGGATGGTTTACGGAGTTTGGAACAGAATTTCCAACAAGTCAAGAAGCACAGCATTCAGTGTTTGTATTATTTTTTTTGGACTTATGCAGCTTACCCGGAGTTTCTTTTTTCTTTATTAGCCATGCATCCGCAATTCAGGACAATCCTGCCCAACCACAGTCACCATCCGTCAGACTCATCAGAATTCGGAGGGTCCAGGTTATGTCTGATATGATTGAAGTATTTAAGGATCCATCAATTATGGCAGCTCAATTAACAGTCAAAATGGTTAATGCTCATGGCCAAGAAGAAGCCGGGACGGATGAAAATGGAGTTTTCAGGGACGCACTGTCAGCATTCTGGACAACATTTGAGAATTCATGCACAGTTGGAGAAGATGAACGAATACCAGTCATTAGATATGACTTTCAGGCTCCAGAGTGGGAAGCCATTGCTAGACTCCTTGTTAAAGGATTTCGTCAGCTTACTTTTTTTCCTGTAAATTTAAATAGGGCATTCCTTATTGCCACAATTTTTGGGGAAAGGGAGGTGACAGAGCAAGTCCTTCTTGATTCTTTCTTAGCCTATCTATCTAGGGATGAAAGGGCTTTGGTTGTGGATGCTCTAAATGGGACTTTGGAAGATGAACACATTCATGAGTGGCTTGATTTCTTAGATAGATTTGGATGGAAGCGAGTTCCAAAGCCTGAGCAGTGCAGGGATACAATTTTAGAAATTGCTCACAAGGAGCAAATACAAGCCTGTCAGTACATCATTAATTGCTGGCATGAGCCATTGTGTAGTTTGAAGACAGCCGCATTCAACATCACGGAACTTGGAAATTTACTAAATAGAGCCATTCCAACAAACAAAAAGGTGATCGATCTCCTTGAAGTCATCCCAGAGCCACAAAATAATGCCCAGAGAGATGCGATATCCTATCTTAAAAGTTACCTGAGAGGTCTAGATAGTGAAAGATTAAGGAAGGTTTTACGTTTTCCTACAGGAGCTAACATCATTTGTGTGGACAAAATTAAGGTTACATTCACCAATCTTGATGGCTTTGAGAGGCGTCCCATAGCTCATACATGTGCCCCAGCTTTAGAATTGCCCTCAACGTACCAAAACTTTGCTGATTTAAGACAAGAAATGAACAGCATCATTGACAGTGAATTCTGGGAAATGAACATTGCTTAAAATTACTCTTACCAGTACTTCCAGTTCTCATAGTTGTTACTGTGCTGAAAAAATTATCTTACTATTTGGTCCAAGCAGGACATTCTCACTTATTTGTTAGAGTTTGCAGCAATGCTTTTCAGATTTCTTTCCTCAATCAAACACAAAAAAAAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR000569	Domain	HECT domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan