Detailed information of aacu_s0051.g71.t1 in Acropora acuminata

Genomic Location: sc0000051_pilon:992516...1017261
NR annotation: XP_015751900.1, PREDICTED: glutamate receptor ionotropic, kainate 3-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B1AS29Glutamate receptor ionotropic, kainate 3 OS=Mus musculus OX=10090 GN=Grik3 PE=1 SV=1
P42264Glutamate receptor ionotropic, kainate 3 OS=Rattus norvegicus OX=10116 GN=Grik3 PE=1 SV=1
Q38PU2Glutamate receptor ionotropic, kainate 3 OS=Macaca fascicularis OX=9541 GN=GRIK3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13613HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR027805DomainTransposase, Helix-turn-helix domainInterproscan
IPR001508FamilyIonotropic glutamate receptor, metazoaInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

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