Detailed information of aacu_s0058.g47.t1 in Acropora acuminata

Genomic Location: sc0000058_pilon:790582...799582
NR annotation: XP_029207414.2, visual system homeobox 2-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O42250Visual system homeobox 1 OS=Danio rerio OX=7955 GN=vsx1 PE=1 SV=2
P58304Visual system homeobox 2 OS=Homo sapiens OX=9606 GN=VSX2 PE=1 SV=1
Q61412Visual system homeobox 2 OS=Mus musculus OX=10090 GN=Vsx2 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023339DomainCVC domainInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR052294FamilyVisual system homeobox transcriptional regulatorsInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46892VISUAL SYSTEM HOMEOBOX 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:1990837Molecular Functionsequence-specific double-stranded DNA bindingInterproscan

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